PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PCP030657.1

Organism

Pyrus communis

Taxonomic ID

23211

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Maleae; Pyrus

Family

ARR-B

Protein Properties

Length: 716aa MW: 80822.1 Da PI: 4.8791

Description

ARR-B family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PCP030657.1	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	G2-like	37.7	4.5e-12	425	455	25	55
G2-like 25 ekAtPktilelmkvkgLtlehvkSHLQkYRl 55 + A Pk+il++m+v+gL e+v SHLQkYRl PCP030657.1 425 DGAHPKKILQHMNVPGLRKENVSSHLQKYRL 455 5699**************************8 PP
2	Response_reg	51.1	7.5e-18	236	343	1	108
EEEESSSHHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHH..ESEEEEESSCTTSEHHHHHHHHHHHTTTSEEEEEESTTTHHHHHHHHHTTES CS Response_reg 1 vlivdDeplvrellrqalekegyeevaeaddgeealellkekd..pDlillDiempgmdGlellkeireeepklpiivvtahgeeedalealkaGak 95 vl vd + + + ll ++l k gy +v +a+ + +al ++++k+ +l+l+ +p+md +ell+++r+ + klp++++++ ++e+ +l l Ga PCP030657.1 236 VLAVDGDSACLTLLSRMLCKLGY-KVLTAKRACDALSIAQKKEneLHLVLTEAHLPDMDKYELLERMRAVS-KLPVVIMSDDDDENAMLGGLFKGAV 330 7899*****************.***********888888********************99.********************* PP EEEESS--HHHHH CS Response_reg 96 dflsKpfdpeelv 108 +++Kp ++ l PCP030657.1 331 YYIVKPLTMDSLK 343 ****9999886 PP

Sequence ? help Back to Top
Protein Sequence Length: 716 aa Download sequence
MQEPSECYYM SDIEAGLGLK RNHLIALSLL VGNDHDLNGV QGIGLDTALP FAQSFCEEEI 60 MSRGVGFYQD CKEKEQKKRK NWRLKVLSKI ALEPNFPNDE IIQMYLRNNH GYFNDRLKIR 120 YGHQFYVVKW KIAAPTLGCV SYSIPPEDSD MQQDDVMEVD ESFSPLDESD VPTIDISGGC 180 CFLLTDENMD VVHAAFPVEV DKFLKEKQSC EAMNDEKAVP VESMKNCSPV FEGVTVLAVD 240 GDSACLTLLS RMLCKLGYKV LTAKRACDAL SIAQKKENEL HLVLTEAHLP DMDKYELLER 300 MRAVSKLPVV IMSDDDDENA MLGGLFKGAV YYIVKPLTMD SLKNLWQFAF ISNRDAVIDL 360 TADDSSGEFQ QEYTSNEGLE IESIMKKEKQ ISRRKSLKRK NPEGMNKDKG GDNSDSNFYP 420 KEAKDGAHPK KILQHMNVPG LRKENVSSHL QKYRLSLKRE QEEIMMRKAR ETTESSFPAS 480 PLNFPGGSSN QFPKRSPFTS TAYQPEIRSH CRNPSSNMTR PSPGSTFVCL PSTQSSNEST 540 FASNHFSSNY KNGQPTLSNH FGKVASYTNF DFPLLLHNYI QQEEHQQQLI QPQVLFSPPS 600 QMPSPLPPPE EQQGNNIFGS ENQLQPQVLL APPSLPPQAE EQENHDDIFG LGKQLQTNDV 660 LLSPQWKLPS LAPTPATQEQ KETDMFGIER GDMDDLFDIA KGTTQQFHDV NFDDFW

Sequence ? help Back to Top

Protein Sequence Length: 716 aa Download sequence

MQEPSECYYM SDIEAGLGLK RNHLIALSLL VGNDHDLNGV QGIGLDTALP FAQSFCEEEI  60
MSRGVGFYQD CKEKEQKKRK NWRLKVLSKI ALEPNFPNDE IIQMYLRNNH GYFNDRLKIR  120
YGHQFYVVKW KIAAPTLGCV SYSIPPEDSD MQQDDVMEVD ESFSPLDESD VPTIDISGGC  180
CFLLTDENMD VVHAAFPVEV DKFLKEKQSC EAMNDEKAVP VESMKNCSPV FEGVTVLAVD  240
GDSACLTLLS RMLCKLGYKV LTAKRACDAL SIAQKKENEL HLVLTEAHLP DMDKYELLER  300
MRAVSKLPVV IMSDDDDENA MLGGLFKGAV YYIVKPLTMD SLKNLWQFAF ISNRDAVIDL  360
TADDSSGEFQ QEYTSNEGLE IESIMKKEKQ ISRRKSLKRK NPEGMNKDKG GDNSDSNFYP  420
KEAKDGAHPK KILQHMNVPG LRKENVSSHL QKYRLSLKRE QEEIMMRKAR ETTESSFPAS  480
PLNFPGGSSN QFPKRSPFTS TAYQPEIRSH CRNPSSNMTR PSPGSTFVCL PSTQSSNEST  540
FASNHFSSNY KNGQPTLSNH FGKVASYTNF DFPLLLHNYI QQEEHQQQLI QPQVLFSPPS  600
QMPSPLPPPE EQQGNNIFGS ENQLQPQVLL APPSLPPQAE EQENHDDIFG LGKQLQTNDV  660
LLSPQWKLPS LAPTPATQEQ KETDMFGIER GDMDDLFDIA KGTTQQFHDV NFDDFW

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G16110.1	3e-39	ARR-B family protein