PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PCP030814.1
Organism
Pyrus communis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Maleae; Pyrus
Family SBP
Protein Properties Length: 313aa    MW: 35269.9 Da    PI: 9.3743
Description SBP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PCP030814.1genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1SBP124.64.1e-3961137278
                  -SSTT-----TT--HHHHHTT--HHHHT-S-EEETTEEEEE-TTTSSEEETTT--SS--S-STTTT-------S--- CS
          SBP   2 CqvegCeadlseakeyhrrhkvCevhskapvvlvsgleqrfCqqCsrfhelsefDeekrsCrrrLakhnerrrkkqa 78 
                  C v+gC+adls+++eyhrrh+vC+ hskapvv+v+g+++rfCqqCsrfh+l +fD+ krsCr+rL++hn+rrrk+++
  PCP030814.1  61 CLVDGCRADLSRCREYHRRHRVCDLHSKAPVVVVRGEQKRFCQQCSRFHSLVDFDKVKRSCRKRLNGHNQRRRKPKP 137
                  **************************************************************************986 PP
Sequence ? help Back to Top
Protein Sequence    Length: 313 aa     Download sequence    
MEYWDFEDSD LAALVGSSIS QPQMENRPAE SLGLEEDPMK LSSSGRLSGS NNGGDKLKFL  60
CLVDGCRADL SRCREYHRRH RVCDLHSKAP VVVVRGEQKR FCQQCSRFHS LVDFDKVKRS  120
CRKRLNGHNQ RRRKPKPESF SFSSHFFFST YKGPRIVQFG SPRVCATTNV RCIWPVKDKK  180
GAESMRSNYH HQWLYAADER SPPNSFKGGG DKQFLFLQAN DPKAAAGNRA APQAFVCQQQ  240
KFPTTIAATS PKSTKGCALY LLSSHPTQNP VSGLNHLAQP TVTTTHPCSH NVEDRPVNPE  300
MMFPMCPDGF WDN
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G50670.17e-40SBP family protein