PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PCP030942.1
Organism
Pyrus communis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Maleae; Pyrus
Family NAC
Protein Properties Length: 280aa    MW: 32339.9 Da    PI: 5.9536
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PCP030942.1genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM125.64e-3971131106
          NAM   1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpk...kvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlsk 95 
                  +ppGfrFhPt+eelv +yLk+k+++ +++l +vi ++d+yk+ePwd+++     ++e++ewyfFs++dkky+tg+r+nrat++g+Wkatg+dk+vls 
  PCP030942.1   7 VPPGFRFHPTEEELVGYYLKRKINSLHIDL-DVIVDIDLYKIEPWDIQArcrLGYSEQNEWYFFSHKDKKYPTGTRTNRATAAGFWKATGRDKAVLS- 102
                  69****************************.99**************953543344778**************************************. PP

          NAM  96 kgelvglkktL 106
                  k++ +g++ktL
  PCP030942.1 103 KDNIIGMRKTL 113
                  8899******9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 280 aa     Download sequence    
MEMESCVPPG FRFHPTEEEL VGYYLKRKIN SLHIDLDVIV DIDLYKIEPW DIQARCRLGY  60
SEQNEWYFFS HKDKKYPTGT RTNRATAAGF WKATGRDKAV LSKDNIIGMR KTLEEGWVVC  120
RAFKKPSPSH RQGFEAWKHA YVRDHPSSSN FSSEIPMVIN PNQGFHQSFG SEEDHFVSNN  180
IFLGNQLMEL PQLESPTIST SFVTKENVLR SNNISTDDYE AERSNNNSSN QHIDWRNLDN  240
LLEVQLTDRA SFSHPSLSSA PQNYEQETQN NHLLGCFQDL
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G71930.11e-73NAC family protein