PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PCP030961.1
Organism
Pyrus communis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Maleae; Pyrus
Family NAC
Protein Properties Length: 192aa    MW: 21867.2 Da    PI: 5.6579
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PCP030961.1genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM61.92e-19754149
          NAM  1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpk 49
                 +ppGfrFhPtdeelv++yL+kkv++++++l +vik+vd+yk+ePwdL+ 
  PCP030961.1  7 VPPGFRFHPTDEELVDYYLRKKVTSRRIDL-DVIKDVDLYKIEPWDLQD 54
                 69****************************.9***************83 PP
Sequence ? help Back to Top
Protein Sequence    Length: 192 aa     Download sequence    
METFSHVPPG FRFHPTDEEL VDYYLRKKVT SRRIDLDVIK DVDLYKIEPW DLQDLDSPGH  60
NSSSMNMNMV PYHHLPSYPC KKELDHLPFQ VPHEHFFQLP LLGSPKLLQS SSATAVSSSN  120
SMAPHAYGID INHACTFQPS DQDQNFHGVV YGNSSNDDHQ RTVDQMTDWR ALDKFVASQL  180
SQDDASKGNS YS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G12260.11e-30NAC family protein