PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PCP031076.1
Organism
Pyrus communis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Maleae; Pyrus
Family LBD
Protein Properties Length: 214aa    MW: 23140.2 Da    PI: 5.9809
Description LBD family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PCP031076.1genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1DUF260137.35.5e-43471461100
       DUF260   1 aCaaCkvlrrkCakdCvlapyfpaeqpkkfanvhklFGasnvlkllkalpeeeredamsslvyeAearardPvyGavgvilklqqqleqlkaelallk 98 
                  +CaaCk+lrr+Ca++Cvlapyfp ++p kf ++h++FGasn++k+l++lpe++r da+ss+vyeA ar+rdPvyG++g i +lq+q+++l+a+la+++
  PCP031076.1  47 PCAACKILRRRCADKCVLAPYFPPSDPVKFTIAHRVFGASNIIKFLQELPESQRADAVSSMVYEASARIRDPVYGCAGAICHLQKQVNELQAQLAKAQ 144
                  7***********************************************************************************************99 PP

       DUF260  99 ee 100
                  +e
  PCP031076.1 145 AE 146
                  87 PP
Sequence ? help Back to Top
Protein Sequence    Length: 214 aa     Download sequence    
MECSTETMNT NYTTTSSTMS QSPPSSSSPS SPPTPTPTPS PPVVISPCAA CKILRRRCAD  60
KCVLAPYFPP SDPVKFTIAH RVFGASNIIK FLQELPESQR ADAVSSMVYE ASARIRDPVY  120
GCAGAICHLQ KQVNELQAQL AKAQAELVNM QCQQTNLVAL ICMEMSHPNS EQGSPPQSLD  180
HNFVATNPHG GNQTNLGFLD DSTTLGSLWE PLWT
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G28500.13e-69LBD family protein