PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PCP031110.1

Organism

Pyrus communis

Taxonomic ID

23211

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Maleae; Pyrus

Family

bHLH

Protein Properties

Length: 415aa MW: 46595.1 Da PI: 7.5348

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PCP031110.1	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	31.3	3.7e-10	240	285	4	54
HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS HLH 4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54 +h e+E++RRd++N+++ Lr+++P+ ++ ++ L Av Y+++L PCP031110.1 240 NHVEAEKQRRDKLNHRICLLRSVVPNV-----SEMDRSSLLADAVAYMNQL 285 799*********************5.....48*************99 PP

Sequence ? help Back to Top
Protein Sequence Length: 415 aa Download sequence
MEGTYILLLF THFLTHISTS CVRFIVQNRP ECWLYAIFWQ ASKDSISDQV ALSWAGGHFN 60 NPRDRVSSNR SNRVITNNYQ PKLGVQQYGE KEDGGDHELQ LYECERVKEA RMHGIQTLVC 120 ITTSCGVLEV ASLDVIMQDW GLVHLSKSLF GSDQKNNKFK LLVPDPLEKI FLSGGQKEFT 180 IQEGGANEPI IHTDGSSTGS SYDSFGNFTP ANTENPQSKK RGRPSSSNHG ATSRQSQLLN 240 HVEAEKQRRD KLNHRICLLR SVVPNVSEMD RSSLLADAVA YMNQLKGKVD ELEAKIQAQP 300 PQKPVLTSQS TRSIADEHHQ CSSCSNNYSN NNNHNNNNDN LNLNNNNDNV RGTNVLEVDV 360 KIVGSNQAMI RVQCPDQDYP YDRLMNALKG LELQVYHASI SSVKRCCGRT ALWRQ

Sequence ? help Back to Top

Protein Sequence Length: 415 aa Download sequence

MEGTYILLLF THFLTHISTS CVRFIVQNRP ECWLYAIFWQ ASKDSISDQV ALSWAGGHFN  60
NPRDRVSSNR SNRVITNNYQ PKLGVQQYGE KEDGGDHELQ LYECERVKEA RMHGIQTLVC  120
ITTSCGVLEV ASLDVIMQDW GLVHLSKSLF GSDQKNNKFK LLVPDPLEKI FLSGGQKEFT  180
IQEGGANEPI IHTDGSSTGS SYDSFGNFTP ANTENPQSKK RGRPSSSNHG ATSRQSQLLN  240
HVEAEKQRRD KLNHRICLLR SVVPNVSEMD RSSLLADAVA YMNQLKGKVD ELEAKIQAQP  300
PQKPVLTSQS TRSIADEHHQ CSSCSNNYSN NNNHNNNNDN LNLNNNNDNV RGTNVLEVDV  360
KIVGSNQAMI RVQCPDQDYP YDRLMNALKG LELQVYHASI SSVKRCCGRT ALWRQ

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G00870.1	1e-42	bHLH family protein