PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PCP031181.1
Organism
Pyrus communis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Maleae; Pyrus
Family bHLH
Protein Properties Length: 283aa    MW: 30664.1 Da    PI: 6.0702
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PCP031181.1genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH32.61.4e-10164211455
                  HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
          HLH   4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                  +h+ +Er RR++i +++  L++l+P +    +k   Ka +L + ++YI+sLq
  PCP031181.1 164 SHSLAERARREKISERMKVLQDLVPGC----NKVIGKALVLDEIINYIQSLQ 211
                  8*************************9....677*****************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 283 aa     Download sequence    
MDPPLINESS SSVATPASYS LAEFWPFSGE PGGSGGGLGL RVGNLGQSLG GLGDSSVNRD  60
GSLEESTVTE QSGGGGGRRK RRDVNFEDES SKRVSTRSGN GLKDLGKRMK LAVSRNENDN  120
LKAEVEESSA AGDNKPAEES TKPSEPPKQD YIHVRARRGQ ATDSHSLAER ARREKISERM  180
KVLQDLVPGC NKVIGKALVL DEIINYIQSL QHQVEFLSMK LEAVNSRMNI NPTIEAFPPK  240
DLGAQPFDAA GLLFSLHTPR EYAQSSQPEW LHMQVGGSFE RAT
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G62610.12e-73bHLH family protein