PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PCP031185.1
Organism
Pyrus communis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Maleae; Pyrus
Family MYB_related
Protein Properties Length: 302aa    MW: 32761.4 Da    PI: 8.5014
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PCP031185.1genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding43.57.3e-1490134347
                      SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS
  Myb_DNA-binding   3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 
                      +WT+eE++l++ + ++ G+g+W+ I+r + k+Rt+ q+ s+ qky
      PCP031185.1  90 PWTEEEHKLFLFGLQKVGKGDWRGISRNFVKTRTPTQVASHAQKY 134
                      8*******************************************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 302 aa     Download sequence    
MSSGTCSTVE PAGAGEIMLF GVRLVVDSMR KSVSLNNLSQ YEQPQEAASN NGNNGTATGK  60
DDAAPGYASE NDVVHNSGGN RERERKRGVP WTEEEHKLFL FGLQKVGKGD WRGISRNFVK  120
TRTPTQVASH AQKYFLRRSN LNRRRRRSSL FDITTDTVAP TPMVEEQVQH QDNISQSQLH  180
PLPPPPPSES RNAGGFSMVP NFPRTVGPAV LPVHIENPMG NLALRQANPE NSTSAKLVHP  240
VALYLAPHAT AISDLNLNST TDTSTLTLNL SLSVDSSEPS SRHSAFQTMS GFSNGDSMIS  300
VA
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G74840.25e-56MYB_related family protein