PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PCP031213.1
Organism
Pyrus communis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Maleae; Pyrus
Family G2-like
Protein Properties Length: 328aa    MW: 35017.8 Da    PI: 6.5111
Description G2-like family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PCP031213.1genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1G2-like955.6e-30154207155
      G2-like   1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 
                  +prl+Wtp+LH+rFve+v++L G+++A+Pkti++lm+v+gLt+e+v+SHLQkYRl
  PCP031213.1 154 RPRLVWTPQLHKRFVEVVAHL-GIKNAVPKTIMQLMNVEGLTRENVASHLQKYRL 207
                  59*******************.********************************8 PP
2Myb_DNA-binding47.83.4e-15156206148
                      TSSS-HHHHHHHHHHHHHTTTT..-HHHHHHHHT.TTS-HHHHHHHHHHHT CS
  Myb_DNA-binding   1 rgrWTteEdellvdavkqlGgg..tWktIartmg.kgRtlkqcksrwqkyl 48 
                      r+ WT+++++++v++v+ lG +   +ktI++ m+ +g+t++++ s++qky+
      PCP031213.1 156 RLVWTPQLHKRFVEVVAHLGIKnaVPKTIMQLMNvEGLTRENVASHLQKYR 206
                      789*******************9***************************7 PP
Sequence ? help Back to Top
Protein Sequence    Length: 328 aa     Download sequence    
MGEEVRMSEY EGAGSGGDNE ARVSEWEAGL PSADDLTPLS QPLIPIELAS AFSISPVPCR  60
TAVDVNRASH KMVSTLRGGA HSQGFSSSNY KSFDENRSDD VVEPMVVEVD ESGERYGSDS  120
RKSRKVDCSA EEADSALRTE NFSPDDTSAR TLKRPRLVWT PQLHKRFVEV VAHLGIKNAV  180
PKTIMQLMNV EGLTRENVAS HLQKYRLYLK RMQGLSGDVG SSSSDKLFAT TPVPQSLRHE  240
SGGGGGGAGG SGQAGPGQSH GNGQFSFPMP YPPAGMMQMP VLGMSHGHGH MGMPGGAGSH  300
GGGYHGFESH YYNMGSMVSY QHAGSNDK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G46640.22e-76G2-like family protein