PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PCP031233.1

Organism

Pyrus communis

Taxonomic ID

23211

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Maleae; Pyrus

Family

NAC

Protein Properties

Length: 602aa MW: 67481.1 Da PI: 4.4357

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PCP031233.1	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	171.8	2.1e-53	9	136	1	128
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLp.k.kvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlskk 96 l+pGfrFhPtdeelv++yLk+kv+gk++++ + i+ vdiyk+ePwdLp k k+k+++ ewyfFs dkky +++r+nrat++gyWk+tgkd+++++ + PCP031233.1 9 LAPGFRFHPTDEELVWYYLKRKVSGKNFRF-DPISVVDIYKTEPWDLPgKsKLKTRDLEWYFFSFLDKKYGNSSRTNRATEKGYWKTTGKDRPIKH-N 104 579************************9.99***********5347777888**********************************.9 PP NAM 97 gelvglkktLvfykgrapkgektdWvmheyrl 128 +++vg+kktLvf++grap+g +t+Wvmheyrl PCP031233.1 105 SRDVGMKKTLVFHSGRAPTGARTNWVMHEYRL 136 99**************************98 PP

Sequence ? help Back to Top
Protein Sequence Length: 602 aa Download sequence
MARGKENSLA PGFRFHPTDE ELVWYYLKRK VSGKNFRFDP ISVVDIYKTE PWDLPGKSKL 60 KTRDLEWYFF SFLDKKYGNS SRTNRATEKG YWKTTGKDRP IKHNSRDVGM KKTLVFHSGR 120 APTGARTNWV MHEYRLSNEE LEKAGIQQKD PYVLCRIFQK SGTGPKNGEK YGAPVMEEEW 180 DDDDVTCVPG EEAAANVVAV SEEPDNEAMD VNNGAYVEAF DLDQNLDTGI LSESAPPPLN 240 FYHGETSNYI EHYGDFVEDD TRAVMGTGET SEYCEHQMFF GYPEHYETVG NPVKNEYITS 300 QNPEDLKFVD LTEHYEADAK PVKDECFLEP SDGANPSVVN YSLNEPYLDA TENKPFGDGL 360 FLETNDLSNP VESTAGFDML DEYLTYFDAN DDISQYIDFD SCGYVPDQGP SDQKLLNGET 420 ELQPMGGDHL VQPEPQPMGG KHLVQPEDTD DASLSKKMPE CKFESDGNYP FIKKASHMML 480 GSIPAPPAFA SEFPAKEAML RLNSGASSSS SVHVTAAMIR IRDITSSDNR MDWSFGKDGV 540 VNLVFSVQLS QNDGNSGNLV PVGGSLSGKT GCVVMRGWFL FMFLWVLFLS MSFKIGSYIC 600 TR

Sequence ? help Back to Top

Protein Sequence Length: 602 aa Download sequence

MARGKENSLA PGFRFHPTDE ELVWYYLKRK VSGKNFRFDP ISVVDIYKTE PWDLPGKSKL  60
KTRDLEWYFF SFLDKKYGNS SRTNRATEKG YWKTTGKDRP IKHNSRDVGM KKTLVFHSGR  120
APTGARTNWV MHEYRLSNEE LEKAGIQQKD PYVLCRIFQK SGTGPKNGEK YGAPVMEEEW  180
DDDDVTCVPG EEAAANVVAV SEEPDNEAMD VNNGAYVEAF DLDQNLDTGI LSESAPPPLN  240
FYHGETSNYI EHYGDFVEDD TRAVMGTGET SEYCEHQMFF GYPEHYETVG NPVKNEYITS  300
QNPEDLKFVD LTEHYEADAK PVKDECFLEP SDGANPSVVN YSLNEPYLDA TENKPFGDGL  360
FLETNDLSNP VESTAGFDML DEYLTYFDAN DDISQYIDFD SCGYVPDQGP SDQKLLNGET  420
ELQPMGGDHL VQPEPQPMGG KHLVQPEDTD DASLSKKMPE CKFESDGNYP FIKKASHMML  480
GSIPAPPAFA SEFPAKEAML RLNSGASSSS SVHVTAAMIR IRDITSSDNR MDWSFGKDGV  540
VNLVFSVQLS QNDGNSGNLV PVGGSLSGKT GCVVMRGWFL FMFLWVLFLS MSFKIGSYIC  600
TR

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G04410.1	1e-130	NAC family protein