PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PCP031312.1
Organism
Pyrus communis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Maleae; Pyrus
Family bHLH
Protein Properties Length: 355aa    MW: 39549.3 Da    PI: 8.1338
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PCP031312.1genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH25.32.8e-08179226455
                  HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
          HLH   4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                  +h+ +Er RR++i +++  L++l+P +    +k    a +L + ++Y++sLq
  PCP031312.1 179 SHSLAERVRREKISERMKMLQKLVPGC----DKVTGRAVMLDEIINYVQSLQ 226
                  8*************************9....55599***************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 355 aa     Download sequence    
MAAFSYNGSL DSIFLPNAPA TNDIIIYSNF FSPSEPLTRE IQADNNSRAV ESSCTMDHSS  60
THKVAFSDNE NEPSVTKNKS TESSTVVDVD RLEIGEQVTQ KVTPMDKKRK FRIGSSFKSA  120
QSKGTQEHKG KKQKKIGGGT KKAEEKKIKS DKKDQVKVRE EPPTGYIHVR ARRGEATDSH  180
SLAERVRREK ISERMKMLQK LVPGCDKVTG RAVMLDEIIN YVQSLQNQVE FLSLKLASSN  240
PMFFEFGMDM GALVVKPERL CSMESPYPPA QQCNPIQSSP FADTSTNITA TTAAATAAIT  300
TNNNYHFLDN SASHLLQRPN TFSQDSESLL WDVEDQRQNF HNPCGFSNSN LCSFN
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1107134KKRKFRIGSSFKSAQSKGTQEHKGKKQK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G50915.22e-51bHLH family protein