PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PCP031412.1

Organism

Pyrus communis

Taxonomic ID

23211

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Maleae; Pyrus

Family

bHLH

Protein Properties

Length: 1616aa MW: 180819 Da PI: 6.9014

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PCP031412.1	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	37.7	3.7e-12	511	556	4	54
HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS HLH 4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54 +h e+Er+RR+++N++f Lr ++P+ K++Ka+ L A+ YI++L PCP031412.1 511 NHVEAERQRREKLNQRFYALRAVVPNV-----SKMDKASLLGDAISYINEL 556 799*********************6.....5*************998 PP

Sequence ? help Back to Top
Protein Sequence Length: 1616 aa Download sequence
MTDYRIPPTT NLWTDDNASL MEAFMSSSDL TSFWAAPPAQ PTPQPAHAPV QPQSSASTSD 60 YPKPPVAAQF QPSVTPFNQE MHDQETLMQR LQALIEGARE SWTYAIFWQS SYDNSGSAVL 120 GWGEGFYKDE RDKVKAKAKT TTSAAEQEYR KKVLRDLNSL ISGADTSADD AVVDQEVTDT 180 EWFFLLSMTQ SFVNGGGLPG QAFFHSTPVW VAGPDRLAVS PCERARQGQV FGLQTMVCVP 240 TANGVVELGS TELIYQSYDL MNKVRVLFDF NNLEVGSCPM SGGATADQGE NDPSSLWLND 300 PSTTTMEVKE PVNTSATTNT SNQLISKPVQ FDNHPSSSSL SENPSPIQVP QLQQQVQQQQ 360 QQQTQSFFTM ELNFSDYDGS SVKNSNSNTH SLKPESGEIL NFGESKRSSY SANGKLFSGH 420 SQITAAEDNN SKKKSSPPSR GSNDEGILSF SSGVILPSSC VVKSSGGADS DHSDLEASVV 480 READSSRVVD PEKRPRKRGR KPANGREEPL NHVEAERQRR EKLNQRFYAL RAVVPNVSKM 540 DKASLLGDAI SYINELKLKL QTVETDKEEL QKQLESMNNH LPCKDSRSSG SIMSEEELKG 600 CSSKLLDMDI DVKIIGRDAM IRIQCCKKNH PAARLMAALK ELDMDVQHAS VSVVNDLMIQ 660 QATVKMGSRI YTQDHLSFKI FLEAQDLIAI DYLILEWKAP SRLVNGKSVI KPKGDKQVRD 720 LKLQMTLSKF EDLRVLESKT FSVFYEKVEM LTNEALGLGK PIDETTIVQK ILRCLPKRFQ 780 AKNAAIQEFQ DLNEIKLGKL VGKLITYEME LDMDENDSKK GKEVALHGVQ NYEVVGDVYR 840 HASEDDLALF VKQFRRIIKN KGKDSKWYLV PGPCFACGGS GHHASNYANT KLLGQKREKA 900 MMVAWSDDNE QGYVQSDESS DDEEKVVAFV APIEEVFLSN DDFVLNGNEE MTYDELCIKC 960 DTLFDETRFT KVEKIELAKK IIELQNENKS LRLVKIELDE KIGYLKAHVK ELKEKAHNCN 1020 EKVEDKVNNV MYHDANIKQL LVLNEANDKV IRLTIGAEKF DKILSFGKQH SDKSGLGFVE 1080 SGSNSIPTKT KFVRESRPVS QNVKPCPKTR YVPTCHHYGE FGHIRRNCKK LYFRKTNLLK 1140 DQAFSSLTSF IDGGVVFGGG DKSQITGKGD VNIPGLPKLE NVNYVDGLKL NLISISQLCD 1200 DVADEVCFSK RGCHIVDELG KNLLVLPRSG DNHYIFYVFK VVEYSKCHKA IDEASVLWHK 1260 ILGHVKFKDL KKLSKHESDE RIFLGYSNIS RAYKVYNPRT KTIMESINVK IDDIDVPPSL 1320 ATENDNVLFP SSKNNDNASS DSSVVLESDN KSESSTDEGS RVLFKDNPKS TRVDKTLFVK 1380 KVKYHVVIAQ VYVDDIVVGS TSDSFVKQFI DMMTSEFEMS LVGELNYFLG LQVKQEKDGI 1440 FIFQTKYAKN LVKKFDLKGS KAARSPMSTC AKIHKDSSGR DVDRSMIESL LYLIASRPDI 1500 TFVVGVLQRT SSTGDRDHAS KEKAYKKLCC VNINIDRSWS GNLTSPPYEQ IENSSIFMPD 1560 KKVVKKGPGH RRLMTTGGVA YEGSVEPRLV RSSGMRRDWS FENLSLLRNE KKGRNS

Sequence ? help Back to Top

Protein Sequence Length: 1616 aa Download sequence

MTDYRIPPTT NLWTDDNASL MEAFMSSSDL TSFWAAPPAQ PTPQPAHAPV QPQSSASTSD  60
YPKPPVAAQF QPSVTPFNQE MHDQETLMQR LQALIEGARE SWTYAIFWQS SYDNSGSAVL  120
GWGEGFYKDE RDKVKAKAKT TTSAAEQEYR KKVLRDLNSL ISGADTSADD AVVDQEVTDT  180
EWFFLLSMTQ SFVNGGGLPG QAFFHSTPVW VAGPDRLAVS PCERARQGQV FGLQTMVCVP  240
TANGVVELGS TELIYQSYDL MNKVRVLFDF NNLEVGSCPM SGGATADQGE NDPSSLWLND  300
PSTTTMEVKE PVNTSATTNT SNQLISKPVQ FDNHPSSSSL SENPSPIQVP QLQQQVQQQQ  360
QQQTQSFFTM ELNFSDYDGS SVKNSNSNTH SLKPESGEIL NFGESKRSSY SANGKLFSGH  420
SQITAAEDNN SKKKSSPPSR GSNDEGILSF SSGVILPSSC VVKSSGGADS DHSDLEASVV  480
READSSRVVD PEKRPRKRGR KPANGREEPL NHVEAERQRR EKLNQRFYAL RAVVPNVSKM  540
DKASLLGDAI SYINELKLKL QTVETDKEEL QKQLESMNNH LPCKDSRSSG SIMSEEELKG  600
CSSKLLDMDI DVKIIGRDAM IRIQCCKKNH PAARLMAALK ELDMDVQHAS VSVVNDLMIQ  660
QATVKMGSRI YTQDHLSFKI FLEAQDLIAI DYLILEWKAP SRLVNGKSVI KPKGDKQVRD  720
LKLQMTLSKF EDLRVLESKT FSVFYEKVEM LTNEALGLGK PIDETTIVQK ILRCLPKRFQ  780
AKNAAIQEFQ DLNEIKLGKL VGKLITYEME LDMDENDSKK GKEVALHGVQ NYEVVGDVYR  840
HASEDDLALF VKQFRRIIKN KGKDSKWYLV PGPCFACGGS GHHASNYANT KLLGQKREKA  900
MMVAWSDDNE QGYVQSDESS DDEEKVVAFV APIEEVFLSN DDFVLNGNEE MTYDELCIKC  960
DTLFDETRFT KVEKIELAKK IIELQNENKS LRLVKIELDE KIGYLKAHVK ELKEKAHNCN  1020
EKVEDKVNNV MYHDANIKQL LVLNEANDKV IRLTIGAEKF DKILSFGKQH SDKSGLGFVE  1080
SGSNSIPTKT KFVRESRPVS QNVKPCPKTR YVPTCHHYGE FGHIRRNCKK LYFRKTNLLK  1140
DQAFSSLTSF IDGGVVFGGG DKSQITGKGD VNIPGLPKLE NVNYVDGLKL NLISISQLCD  1200
DVADEVCFSK RGCHIVDELG KNLLVLPRSG DNHYIFYVFK VVEYSKCHKA IDEASVLWHK  1260
ILGHVKFKDL KKLSKHESDE RIFLGYSNIS RAYKVYNPRT KTIMESINVK IDDIDVPPSL  1320
ATENDNVLFP SSKNNDNASS DSSVVLESDN KSESSTDEGS RVLFKDNPKS TRVDKTLFVK  1380
KVKYHVVIAQ VYVDDIVVGS TSDSFVKQFI DMMTSEFEMS LVGELNYFLG LQVKQEKDGI  1440
FIFQTKYAKN LVKKFDLKGS KAARSPMSTC AKIHKDSSGR DVDRSMIESL LYLIASRPDI  1500
TFVVGVLQRT SSTGDRDHAS KEKAYKKLCC VNINIDRSWS GNLTSPPYEQ IENSSIFMPD  1560
KKVVKKGPGH RRLMTTGGVA YEGSVEPRLV RSSGMRRDWS FENLSLLRNE KKGRNS

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	493	501	KRPRKRGRK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G32640.1	0.0	bHLH family protein