PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PCP031492.1

Organism

Pyrus communis

Taxonomic ID

23211

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Maleae; Pyrus

Family

CAMTA

Protein Properties

Length: 1075aa MW: 120316 Da PI: 5.6297

Description

CAMTA family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PCP031492.1	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	CG-1	141.3	2.9e-44	2	85	35	118
CG-1 35 ksgsliLynrkkvryfrkDGyswkkkkdgktvrEdhekLKvggvevlycyYahseenptfqrrcywlLeeelekivlvhylevk 118 +sgsl+L++rk++ryfrkDG++w+kkkdgktv+E+he+LK g+v+vl+cyYah+een++fqrr+yw+Lee+l++ivlvhy+evk PCP031492.1 2 ESGSLFLFDRKVLRYFRKDGHNWRKKKDGKTVKEAHERLKAGSVDVLHCYYAHGEENENFQRRSYWMLEEALQHIVLVHYREVK 85 69*******************************************************************************986 PP

Sequence ? help Back to Top
Protein Sequence Length: 1075 aa Download sequence
MESGSLFLFD RKVLRYFRKD GHNWRKKKDG KTVKEAHERL KAGSVDVLHC YYAHGEENEN 60 FQRRSYWMLE EALQHIVLVH YREVKGNRTN YNHIKGTEEG VPYSHETEEV ALNSEMDNSV 120 SSSFNPSSFQ MRSQATDATS LSSAQASEFE DAESVYNHQA SSQLQPFLEL LQPKAEKTNA 180 GVSTAFYPMS FSDEYQEKLS AIPGVNFSSH TQAYRKEDVK DAGVTYDPRR NLNSTLCDGA 240 LGNITTGFQS LPFQPSISAT HSDSTGIISK QENETFGHLF TNNFGKKQMY EDRPRVQQSW 300 QFVEGSYLGS SITLAPLQQT LEANSSGSSS GPVDQNLHSN TAYDVSTRFH EGVDASNLLN 360 SLVCHVDSDK TNDYSMPNDL QIQPSNPEQE YHLKSISKRD ETIEGSYNHA FATRPLLDEG 420 LKKLDSFNRW MSKELGDVDE TQTQSNSETY WDTVESENGV DESSVPLHVR LDSYMLGPSL 480 SQDQLFSIID FSPNWAYENS EIKVLITGRF LKSQEAESCK WSCMFGEVEV PAEVIADGVL 540 RCYTPIHKAG RIPFYVTCSN RLACSEIREF EYRVGQIPDY DAKDDYSGCM NEILNMRFGK 600 LLSLSSSSPT FDPTSIAENS ELISKIDLLL KNDNGEWDRM LQLTSDEDFS LERVEDQLLQ 660 QLLKEKLHAW LLQKLAAGGK GPSVLDEGGQ GVLHFGAALG YDWVLLPTIT AGVSVNFRDV 720 NGWTALHWAA FHGRERTVAS LISLGAAPGL LTDPRTKYPA GRTPADLASA QGHKGIAGYL 780 AESALSDHLS FLNLDVKEGN NAEISGAKAV ETASERIATP IRNGDLMGGL SLRDSLTAVC 840 NATQAAARIH QVLRVKSFQR KQLKEYGSDN FGISDEDALS LIAVKSHKAG KRDEHVDAAA 900 IRIQNKFRSW KGRKDYLIIR QRIVKIQAHV RGHQVRKNYR KIVWSVGIVE KIILRWRRKG 960 SGLRGFKPEA LAEPPSMQAS SSKDDDYDVL KEGRKQTEQR LQKALARVKS MVRYPEARDQ 1020 YSRLLNVVTE IQETKVVYDS IMNSSDGRAD MDDDLVDIAA LLDEDDVCMP TAAPE

Sequence ? help Back to Top

Protein Sequence Length: 1075 aa Download sequence

MESGSLFLFD RKVLRYFRKD GHNWRKKKDG KTVKEAHERL KAGSVDVLHC YYAHGEENEN  60
FQRRSYWMLE EALQHIVLVH YREVKGNRTN YNHIKGTEEG VPYSHETEEV ALNSEMDNSV  120
SSSFNPSSFQ MRSQATDATS LSSAQASEFE DAESVYNHQA SSQLQPFLEL LQPKAEKTNA  180
GVSTAFYPMS FSDEYQEKLS AIPGVNFSSH TQAYRKEDVK DAGVTYDPRR NLNSTLCDGA  240
LGNITTGFQS LPFQPSISAT HSDSTGIISK QENETFGHLF TNNFGKKQMY EDRPRVQQSW  300
QFVEGSYLGS SITLAPLQQT LEANSSGSSS GPVDQNLHSN TAYDVSTRFH EGVDASNLLN  360
SLVCHVDSDK TNDYSMPNDL QIQPSNPEQE YHLKSISKRD ETIEGSYNHA FATRPLLDEG  420
LKKLDSFNRW MSKELGDVDE TQTQSNSETY WDTVESENGV DESSVPLHVR LDSYMLGPSL  480
SQDQLFSIID FSPNWAYENS EIKVLITGRF LKSQEAESCK WSCMFGEVEV PAEVIADGVL  540
RCYTPIHKAG RIPFYVTCSN RLACSEIREF EYRVGQIPDY DAKDDYSGCM NEILNMRFGK  600
LLSLSSSSPT FDPTSIAENS ELISKIDLLL KNDNGEWDRM LQLTSDEDFS LERVEDQLLQ  660
QLLKEKLHAW LLQKLAAGGK GPSVLDEGGQ GVLHFGAALG YDWVLLPTIT AGVSVNFRDV  720
NGWTALHWAA FHGRERTVAS LISLGAAPGL LTDPRTKYPA GRTPADLASA QGHKGIAGYL  780
AESALSDHLS FLNLDVKEGN NAEISGAKAV ETASERIATP IRNGDLMGGL SLRDSLTAVC  840
NATQAAARIH QVLRVKSFQR KQLKEYGSDN FGISDEDALS LIAVKSHKAG KRDEHVDAAA  900
IRIQNKFRSW KGRKDYLIIR QRIVKIQAHV RGHQVRKNYR KIVWSVGIVE KIILRWRRKG  960
SGLRGFKPEA LAEPPSMQAS SSKDDDYDVL KEGRKQTEQR LQKALARVKS MVRYPEARDQ  1020
YSRLLNVVTE IQETKVVYDS IMNSSDGRAD MDDDLVDIAA LLDEDDVCMP TAAPE

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G22300.2	0.0	CAMTA family protein