PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PCP031780.1
Organism
Pyrus communis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Maleae; Pyrus
Family GRAS
Protein Properties Length: 180aa    MW: 20048.3 Da    PI: 9.8732
Description GRAS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PCP031780.1genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GRAS133.91.8e-413178190374
         GRAS 190 eleeLrvkpgEalaVnlvlqlhrlldesvsleserdevLklvkslsPkvvvvveqe..adhnsesFlerflealeyysalfdsleaklpreseerikv 285
                  ++++ ++  gE++aV l+  + r l    +++++++ +L  ++++sP vvv+v+ e   d +++sF + f++ le++s +++sl+a+++  s+  +k+
  PCP031780.1   3 SFKAVKFMDGEKTAVLLSPYILRRL----CSQNNISCFLGDMRRVSPSVVVFVNGEgmGDSGTTSFRRNFVSGLEFFSNMLESLDASVAVSSDVVKKI 96 
                  567888999*********9999998....44444667*****************9965566999********************************** PP

         GRAS 286 ErellgreivnvvacegaerrerhetlekWrerleeaGFkpvplsekaakqaklllrkvksdgyrveeesgslvlgWkdrpLvsvSaWr 374
                  E +ll+++i+ +v ++g++          Wre ++ aG+++++ls++a  qa++ll kv+++g++v +++++lvl+W+dr+Lv++SaWr
  PCP031780.1  97 ETFLLRPKIQAAVEAAGRR-------IPPWREVFQGAGMRAMELSQFADFQAQCLLGKVQVRGFHVAKRQAELVLCWHDRALVATSAWR 178
                  *****************98.......99************************************************************8 PP
Sequence ? help Back to Top
Protein Sequence    Length: 180 aa     Download sequence    
MMSFKAVKFM DGEKTAVLLS PYILRRLCSQ NNISCFLGDM RRVSPSVVVF VNGEGMGDSG  60
TTSFRRNFVS GLEFFSNMLE SLDASVAVSS DVVKKIETFL LRPKIQAAVE AAGRRIPPWR  120
EVFQGAGMRA MELSQFADFQ AQCLLGKVQV RGFHVAKRQA ELVLCWHDRA LVATSAWRCS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G36710.12e-65GRAS family protein