PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PCP031899.1
Organism
Pyrus communis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Maleae; Pyrus
Family MYB_related
Protein Properties Length: 103aa    MW: 12513.3 Da    PI: 8.751
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PCP031899.1genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding21.55.6e-073471544
                     -HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHH CS
  Myb_DNA-binding  5 TteEdellvdavkqlGggtWktIartmgkgRtlkqcksrw 44
                     T++E++l+++  ++ G++ W++Ia +++ gR ++ +  +w
      PCP031899.1 34 TEQEEDLIYRMYRLVGPR-WDLIAGRIP-GRKAEVLERFW 71
                     9***************99.*********.**999888888 PP
Sequence ? help Back to Top
Protein Sequence    Length: 103 aa     Download sequence    
MESMDRCHQK RPKITITDQS EEVISNEWKF INITEQEEDL IYRMYRLVGP RWDLIAGRIP  60
GRKAEVLERF WIMRHCDAFA EKRNQHKIEG SNIDRRQMFN GFK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G53200.12e-33MYB_related family protein