PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PCP032007.1

Organism

Pyrus communis

Taxonomic ID

23211

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Maleae; Pyrus

Family

MYB

Protein Properties

Length: 270aa MW: 31067.6 Da PI: 8.8559

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PCP032007.1	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	59.9	5.6e-19	23	70	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +g+WT+eEd ll+++v+ +G g+W+++ar g++R +k+c++rw +yl PCP032007.1 23 KGPWTAEEDRLLIEYVRVHGEGRWNSVARLAGLKRNGKSCRLRWVNYL 70 79********************************************97 PP
2	Myb_DNA-binding	53.8	4.5e-17	76	120	1	47
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 rg T+ E+ ++vd+++++G++ W+tIar ++ gRt++++k++w+++ PCP032007.1 76 RGQITPHEERIIVDLHARWGNR-WSTIARSLP-GRTDNEIKNYWRTH 120 7888****************.*****.**********97 PP

Sequence ? help Back to Top
Protein Sequence Length: 270 aa Download sequence
MYLGMMAGHH MGWGLIEEEG WRKGPWTAEE DRLLIEYVRV HGEGRWNSVA RLAGLKRNGK 60 SCRLRWVNYL RPDLKRGQIT PHEERIIVDL HARWGNRWST IARSLPGRTD NEIKNYWRTH 120 FKKKAVKAPS DASEKAKNRL LRXXXXXXXX XXXXXXXXXX INQADVKKIM ALLDENDNNK 180 IPSCWSQVKP DSETSTTTSV YPNTADQEQG FFCSMLHGNV YIPEPASTNE DNYLWDGLWN 240 LDDIHGNFNT ASACSTGKPS LLTNLVVPFY

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G24310.1	2e-90	MYB family protein