PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PCP032008.1

Organism

Pyrus communis

Taxonomic ID

23211

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Maleae; Pyrus

Family

LBD

Protein Properties

Length: 105aa MW: 11875.2 Da PI: 4.6708

Description

LBD family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PCP032008.1	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	DUF260	44.6	4e-14	1	55	46	100
DUF260 46 lkalpeeeredamsslvyeAearardPvyGavgvilklqqqleqlkaelallkee 100 +++lp + re+a++s++yeA r++dPvyG+v++i++lq+++ ++++e+ +++ + PCP032008.1 1 MQQLPVHLREAAADSMFYEASLRVEDPVYGCVRIISQLQHHILEAQSEILKTNGQ 55 689999*****************************************99887765 PP

Sequence ? help Back to Top
Protein Sequence Length: 105 aa Download sequence
MQQLPVHLRE AAADSMFYEA SLRVEDPVYG CVRIISQLQH HILEAQSEIL KTNGQIASYI 60 AQQQLQQQQQ NVVHGASYQQ DMQISEYLGV GSDVQTLAND SYFHP

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G26660.1	4e-14	LBD family protein