PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PCP032166.1

Organism

Pyrus communis

Taxonomic ID

23211

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Maleae; Pyrus

Family

SBP

Protein Properties

Length: 163aa MW: 18651.9 Da PI: 10.281

Description

SBP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PCP032166.1	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	SBP	130.3	6.9e-41	60	136	1	77
--SSTT-----TT--HHHHHTT--HHHHT-S-EEETTEEEEE-TTTSSEEETTT--SS--S-STTTT-------S-- CS SBP 1 lCqvegCeadlseakeyhrrhkvCevhskapvvlvsgleqrfCqqCsrfhelsefDeekrsCrrrLakhnerrrkkq 77 +Cq+++C+adls+ k+yhr+hkvC+ hsk++vvlvsgl+qrfCqqCsrfhelsefD++krsCrrrL++hnerrrk+ PCP032166.1 60 RCQADRCTADLSDEKKYHRKHKVCDLHSKSQVVLVSGLHQRFCQQCSRFHELSEFDDTKRSCRRRLSGHNERRRKNP 136 6**************************************************************************86 PP

Sequence ? help Back to Top
Protein Sequence Length: 163 aa Download sequence
MEGMSKLDSD KQMKEKPHVV VVVKKEEEEF DDELQVDRKK KGKRSSSSSS GGGGGGAMRR 60 CQADRCTADL SDEKKYHRKH KVCDLHSKSQ VVLVSGLHQR FCQQCSRFHE LSEFDDTKRS 120 CRRRLSGHNE RRRKNPAESH AVEGSSRNVG TRTQSTHKHF QIK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G53160.1	1e-41	SBP family protein