PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PCP032179.1
Organism
Pyrus communis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Maleae; Pyrus
Family Dof
Protein Properties Length: 81aa    MW: 9290.47 Da    PI: 10.2111
Description Dof family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PCP032179.1genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-Dof105.82.3e-333279350
       zf-Dof  3 ekalkcprCdstntkfCyynnyslsqPryfCkaCrryWtkGGalrnvP 50
                 ++alkcprCds ntkfCyynny+lsqPr+fCkaCrryWtkGG lrnvP
  PCP032179.1 32 QHALKCPRCDSLNTKFCYYNNYNLSQPRHFCKACRRYWTKGGVLRNVP 79
                 6789*******************************************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 81 aa     Download sequence    
MQDIHSVRGG GRFFGGSGGG DPRLRPHQHP NQHALKCPRC DSLNTKFCYY NNYNLSQPRH  60
FCKACRRYWT KGGVLRNVPN D
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G60850.16e-30Dof family protein