PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PCP032418.1
Organism
Pyrus communis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Maleae; Pyrus
Family bHLH
Protein Properties Length: 290aa    MW: 31352.8 Da    PI: 6.6312
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PCP032418.1genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH29.81.1e-09173220455
                  HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
          HLH   4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                  +h+ +Er RR++i +++  L++l+P +    +k   Ka +L + ++Y++sLq
  PCP032418.1 173 SHSLAERARREKISERMKILQDLVPGC----NKVIGKALVLDEIINYVQSLQ 220
                  8*************************9....677*****************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 290 aa     Download sequence    
MDPPALVNEC LFPNANATSF NLSEIWEFPM NGSGASAGDS GGALGLRRPN FSQSFAQFGD  60
VSGAIRDVLA DSDPNTMSLD HRGNHGGGHG GASRKRPDAD AESPKSSGHI GVSDCDGKRL  120
KASPRCRDES ARESKAEAET SSGKPAEPNA QLPDPPKQDY IHVRARRGQA TDSHSLAERA  180
RREKISERMK ILQDLVPGCN KVIGKALVLD EIINYVQSLQ RQVEFLSMKL EAVNTRMNPG  240
IEAFPSKEFG QQTFDAASMA FGTQPPRDYS RGNSPEWLHM QVGGGFDRAT
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G59640.11e-95bHLH family protein