PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PCP032447.1
Organism
Pyrus communis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Maleae; Pyrus
Family B3
Protein Properties Length: 250aa    MW: 28051.3 Da    PI: 9.7567
Description B3 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PCP032447.1genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B340.25.9e-131632371698
                  EE--HHH.HTT..---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEEEE- CS
           B3  16 lvlpkkfaeeh..ggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvkvfr 98 
                  l l  +f+++h  +    ++  +tl de+g ++   +  rk++    l++GWk+F+ a++L +gD +vF+l++ ++f  +v ++r
  PCP032447.1 163 LGLQVSFCKNHlpK----GDEVMTLIDEDGDEYPTIYLARKTG----LSGGWKGFAVAHDLVDGDALVFQLIRPTTF--KVYIIR 237
                  678899**888442....4458***************656665....************************997777..888877 PP
Sequence ? help Back to Top
Protein Sequence    Length: 250 aa     Download sequence    
MVMAKSKLSY EESRQQRLEE NKKRMEALNL PMLAQALNKT PNSPKPSPMK RAGKPRTYEV  60
QMVEVRRSTR VTNRPAPDYK EVVAERVMIP RRSYATNRHR DVANRVYASD ETRAAAMVKA  120
DELEASLGSD HPTLVKTMLQ SHVTGGFWLV NIILILSLYA VCLGLQVSFC KNHLPKGDEV  180
MTLIDEDGDE YPTIYLARKT GLSGGWKGFA VAHDLVDGDA LVFQLIRPTT FKVYIIRVER  240
PGQASSEGST
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G42700.14e-77B3 family protein