PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PCP032616.1

Organism

Pyrus communis

Taxonomic ID

23211

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Maleae; Pyrus

Family

bHLH

Protein Properties

Length: 742aa MW: 82254.1 Da PI: 6.0653

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PCP032616.1	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	12.5	0.00027	571	608	13	55
HHHHHHHHHHHHCTSCC.C...TTS-STCHHHHHHHHHHHHHHH CS HLH 13 RdriNsafeeLrellPk.askapskKlsKaeiLekAveYIksLq 55 R+ i +++ eLrel+P+ a K s + Le++++++ Lq PCP032616.1 571 RQLIQDRIKELRELIPTgA------KCSIDSLLERTIKHMLFLQ 608 67799************77......7777779999999999998 PP

Sequence ? help Back to Top
Protein Sequence Length: 742 aa Download sequence
MGTDLHNILR SLCFNTEWNY AVSWKLKHRA RMVLTCEDAY FDNCEQHDSS EIRCFSKTLD 60 KLHDCHYSHD PLRLAVAKMS CHVYNLGEGI VGQVAVTGEH QWIYADDLVN NNCSPLQYCD 120 GWQSQFSAGI RTIVVVAVVP HGVIQLGSLN KVAENVKLIS QITDAFKTLQ DFPIDHIPNP 180 KQYSINSSVC STNISLERLA SGVLPDCVNN LDTATNRESS DIWSSIFPHL GKDNDSSYIS 240 SLTENCLKEE VELANKHGGL ESSNFRCVEI GKLPQSKSSA LSMEHRKLVG VELLDSRKCK 300 GESSGCKDTG MASMIYAHPL SHDPVKDIVN LCDFADLPTT FLDSTAHERI NADRVDLHQN 360 EVLHVSEPSV VKFQKGLENL EFQTESGHMD TSSTSMAFPA GCELHEALGP AFLNQGNYFD 420 WVAGKNGDRI TPEIPEGMNT SQLTSDSCQE HLLEAVVANV CQSGSLVKNE KSFCKSMQSL 480 LTTEKYPEPS GRITRTIDSE NFSIDQPSLT GEDMQQCLSS SGVCGVISPK WFSSPCPSAC 540 SEQPERSSGL SKNSKKRARP GESSRPRPRD RQLIQDRIKE LRELIPTGAK CSIDSLLERT 600 IKHMLFLQSV TKHADKLNKC ADAKLCPKEA SMLGSSNYER GSSWAVEVGG NLKVCSIIVE 660 NLNKNGQMVV ELMCEECSHF LEIAEAIRCS GLTILKGVTE ARGDKTWICF VVEGQNNRSI 720 HRMDILWSLV QILQPKNPTQ QL

Sequence ? help Back to Top

Protein Sequence Length: 742 aa Download sequence

MGTDLHNILR SLCFNTEWNY AVSWKLKHRA RMVLTCEDAY FDNCEQHDSS EIRCFSKTLD  60
KLHDCHYSHD PLRLAVAKMS CHVYNLGEGI VGQVAVTGEH QWIYADDLVN NNCSPLQYCD  120
GWQSQFSAGI RTIVVVAVVP HGVIQLGSLN KVAENVKLIS QITDAFKTLQ DFPIDHIPNP  180
KQYSINSSVC STNISLERLA SGVLPDCVNN LDTATNRESS DIWSSIFPHL GKDNDSSYIS  240
SLTENCLKEE VELANKHGGL ESSNFRCVEI GKLPQSKSSA LSMEHRKLVG VELLDSRKCK  300
GESSGCKDTG MASMIYAHPL SHDPVKDIVN LCDFADLPTT FLDSTAHERI NADRVDLHQN  360
EVLHVSEPSV VKFQKGLENL EFQTESGHMD TSSTSMAFPA GCELHEALGP AFLNQGNYFD  420
WVAGKNGDRI TPEIPEGMNT SQLTSDSCQE HLLEAVVANV CQSGSLVKNE KSFCKSMQSL  480
LTTEKYPEPS GRITRTIDSE NFSIDQPSLT GEDMQQCLSS SGVCGVISPK WFSSPCPSAC  540
SEQPERSSGL SKNSKKRARP GESSRPRPRD RQLIQDRIKE LRELIPTGAK CSIDSLLERT  600
IKHMLFLQSV TKHADKLNKC ADAKLCPKEA SMLGSSNYER GSSWAVEVGG NLKVCSIIVE  660
NLNKNGQMVV ELMCEECSHF LEIAEAIRCS GLTILKGVTE ARGDKTWICF VVEGQNNRSI  720
HRMDILWSLV QILQPKNPTQ QL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G31280.1	1e-180	bHLH family protein