PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PCP032786.1

Organism

Pyrus communis

Taxonomic ID

23211

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Maleae; Pyrus

Family

Nin-like

Protein Properties

Length: 988aa MW: 108563 Da PI: 5.5316

Description

Nin-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PCP032786.1	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	RWP-RK	91.8	5.2e-29	588	639	1	52
RWP-RK 1 aekeisledlskyFslpikdAAkeLgvclTvLKriCRqyGIkRWPhRkiksl 52 aek+isle+l++yF++++kdAAk+Lgvc+T++KriCR++GI+RWP+Rkik++ PCP032786.1 588 AEKSISLEVLQQYFAGSLKDAAKSLGVCPTTMKRICRHHGISRWPSRKIKKV 639 589***********************************************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 988 aa Download sequence
MSDPEDETQA PAIPPKPKNE REAALMDFDL DLDAFWPLDP NHFLSNPTSP LLLPSNDQPC 60 TPLWAFPDGD ADGDDKLAVH VGQDLSDPSQ FVSCNSNSVT QWSTENKDNR LLPSLFSGLE 120 PVESSDGYSL FKEKITQALR YLKELTDQHV LAQVWVPVKD GNRYVLTTSG QPFVLDQHNI 180 GLHQYRMASL MYMFSVGGES DGMLGLPGRV FQHKLPEWTP NVQYYSIKEY PRLGHAQHYN 240 VQGTLALPVF EPSGRSCAGV LELIMTSPII NCGPEVDKVC KALEAVSLKS SEILDHPSRQ 300 IQICNEGRQT ALAEILKILT VVCETYKLPL AQTWVPCMHR SVLAYGGGLK KSCTSFDGSC 360 MEQVSMSTTD VAFYIIDAHM WRFRDACVEH HLQKGQGVAG RAFSSRNACF CRDITQFCKT 420 EYPLVHYARM FGLASSFAIC LQSTHTGNDD YILEFFLPPS ITDSHEQQTL LGSILAIMKN 480 DFRSLSVASG IVLEEEGIVE IVQVSANNGL ATRLECILIP HSVESPPGPA LPNREEMVQL 540 DSSKPQLKVV YDVVNDERNP VHEGGENNIS LPENKDIKKR PEKKRGKAEK SISLEVLQQY 600 FAGSLKDAAK SLGVCPTTMK RICRHHGISR WPSRKIKKVN RSLTKLQRVI DSVQGAEGAF 660 GLTPLTASPR PVAAGSISQP CNLNGSNKQG SPSSKPCEVS GEKKDSTTST SPGTEGQAGI 720 DNHLLDGWIL SHEELVPEHN RFLRDRGKGS NTSNTGSSSR EASAGTPTSH GSCQGSPGNG 780 IAVVNDPYVP FIHEQCIEVN GSPQSAVRTT EESNLLVACS IPDALLMAEP EEPCRGMLLG 840 DAGSSKDLRN LCPLADTIMD EQVREAWNTN PPFLDSAPKQ SNTMPDIMGR QEMKSVIIKA 900 TYKEDIIRFR VSMSSGIVEL KEAVAKRLKL EVGTFDIKYV DDDLERVLVA CDADLQECME 960 VCRTSGSNMI RLSVHDLMSH LGSSCWNA

Sequence ? help Back to Top

Protein Sequence Length: 988 aa Download sequence

MSDPEDETQA PAIPPKPKNE REAALMDFDL DLDAFWPLDP NHFLSNPTSP LLLPSNDQPC  60
TPLWAFPDGD ADGDDKLAVH VGQDLSDPSQ FVSCNSNSVT QWSTENKDNR LLPSLFSGLE  120
PVESSDGYSL FKEKITQALR YLKELTDQHV LAQVWVPVKD GNRYVLTTSG QPFVLDQHNI  180
GLHQYRMASL MYMFSVGGES DGMLGLPGRV FQHKLPEWTP NVQYYSIKEY PRLGHAQHYN  240
VQGTLALPVF EPSGRSCAGV LELIMTSPII NCGPEVDKVC KALEAVSLKS SEILDHPSRQ  300
IQICNEGRQT ALAEILKILT VVCETYKLPL AQTWVPCMHR SVLAYGGGLK KSCTSFDGSC  360
MEQVSMSTTD VAFYIIDAHM WRFRDACVEH HLQKGQGVAG RAFSSRNACF CRDITQFCKT  420
EYPLVHYARM FGLASSFAIC LQSTHTGNDD YILEFFLPPS ITDSHEQQTL LGSILAIMKN  480
DFRSLSVASG IVLEEEGIVE IVQVSANNGL ATRLECILIP HSVESPPGPA LPNREEMVQL  540
DSSKPQLKVV YDVVNDERNP VHEGGENNIS LPENKDIKKR PEKKRGKAEK SISLEVLQQY  600
FAGSLKDAAK SLGVCPTTMK RICRHHGISR WPSRKIKKVN RSLTKLQRVI DSVQGAEGAF  660
GLTPLTASPR PVAAGSISQP CNLNGSNKQG SPSSKPCEVS GEKKDSTTST SPGTEGQAGI  720
DNHLLDGWIL SHEELVPEHN RFLRDRGKGS NTSNTGSSSR EASAGTPTSH GSCQGSPGNG  780
IAVVNDPYVP FIHEQCIEVN GSPQSAVRTT EESNLLVACS IPDALLMAEP EEPCRGMLLG  840
DAGSSKDLRN LCPLADTIMD EQVREAWNTN PPFLDSAPKQ SNTMPDIMGR QEMKSVIIKA  900
TYKEDIIRFR VSMSSGIVEL KEAVAKRLKL EVGTFDIKYV DDDLERVLVA CDADLQECME  960
VCRTSGSNMI RLSVHDLMSH LGSSCWNA

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G24020.1	0.0	Nin-like family protein