PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PCP032820.1
Organism
Pyrus communis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Maleae; Pyrus
Family BBR-BPC
Protein Properties Length: 311aa    MW: 34940.5 Da    PI: 10.0651
Description BBR-BPC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PCP032820.1genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GAGA_bind361.91.3e-11013111301
    GAGA_bind   1 mdddgsre..rnkg.yye...............pa.aslkenlglqlmssiaerdakirernlalsekkaavaerdmaflqrdkalaernkalverdn 79 
                  mdd  ++e  r+k  yy+               ++ ++l   +++++ms+ia+rda+irern+al+ek++a+a+rd+a+ qrd+ala+r+ al+erdn
  PCP032820.1   1 MDDGRQHEngRHKMdYYRggvaspwnmmtqqqaKEpNALV--MNKKIMSIIADRDAAIRERNAALAEKNEALAARDEALRQRDEALAQRDSALMERDN 96 
                  6776665558999889999999999999987653345666..99****************************************************** PP

    GAGA_bind  80 kllalllvenslasalpvgvqvlsgtksidslqqlsepqledsavelreeeklealpieeaaeeakekkkkkkrqrakkpkekkak.kkkkksekskk 176
                  +++al  ++n+   + p g ++ +g+k ++   + +   l+d  + +++ + +ea+pi+   +ea +++++k+    k++k+++ak + kk +e+ ++
  PCP032820.1  97 AYAALHSRDNA--VNFPLGGGAQRGSKRLQRPSN-HSVTLADVHYSTKDVHVTEAYPISVISPEAVKSRQTKRA---KENKASRAKqSRKKVGEDLNR 188
                  *******9998..5678899999*******8877.789***************************999999944...444444444133444667777 PP

    GAGA_bind 177 kvkkesaderskaekksidlvlngvslDestlPvPvCsCtGalrqCYkWGnGGWqSaCCtttiSvyPLPvstkrrgaRiagrKmSqgafkklLekLaa 274
                  + ++++   + k+e+++ dl+ln vs+Dest+PvPvCsCtG++rqCYkWGnGGWqS+CCtt +S+yPLP+++++r+aR++grKmS+++f++lL++Laa
  PCP032820.1 189 QASSDG--IKYKSEWDTHDLGLNLVSFDESTMPVPVCSCTGIPRQCYKWGNGGWQSSCCTTHMSMYPLPQMPNKRHARMGGRKMSGSVFTRLLSRLAA 284
                  766666..57**************************************************************************************** PP

    GAGA_bind 275 eGydlsnpvDLkdhWAkHGtnkfvtir 301
                  +G+dls p+DLk++WA+HGtn+++ti+
  PCP032820.1 285 DGHDLSIPLDLKEYWARHGTNRYITIK 311
                  **************************8 PP
Sequence ? help Back to Top
Protein Sequence    Length: 311 aa     Download sequence    
MDDGRQHENG RHKMDYYRGG VASPWNMMTQ QQAKEPNALV MNKKIMSIIA DRDAAIRERN  60
AALAEKNEAL AARDEALRQR DEALAQRDSA LMERDNAYAA LHSRDNAVNF PLGGGAQRGS  120
KRLQRPSNHS VTLADVHYST KDVHVTEAYP ISVISPEAVK SRQTKRAKEN KASRAKQSRK  180
KVGEDLNRQA SSDGIKYKSE WDTHDLGLNL VSFDESTMPV PVCSCTGIPR QCYKWGNGGW  240
QSSCCTTHMS MYPLPQMPNK RHARMGGRKM SGSVFTRLLS RLAADGHDLS IPLDLKEYWA  300
RHGTNRYITI K
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G21240.11e-127BBR-BPC family protein