PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PCP032837.1

Organism

Pyrus communis

Taxonomic ID

23211

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Maleae; Pyrus

Family

DBB

Protein Properties

Length: 381aa MW: 41551.3 Da PI: 6.133

Description

DBB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PCP032837.1	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-B_box	22.6	2.1e-07	14	58	2	40
zf-B_box 2 eerkCpeHeekelqlfCedCqqllCedClleeHkg......Htvv 40 ++r+C+ ++ + l+C+ ++ lC +C e H+ Ht++ PCP032837.1 14 RKRVCDYCGTSMALLYCRADSAKLCFSCDREVHSAnqlftkHTRS 58 5789****99*******************667888888875 PP
2	zf-B_box	31.3	4.2e-10	59	105	4	41
zf-B_box 4 rkCpeHeekelqlfCedCqqllCedClleeHkg.........Htvvp 41 C+ +++ ++++fC++ ++ lC++C e+H+ H+++p PCP032837.1 59 LLCDACDKSPASIFCTTEGSVLCQNCDWESHNIssstaatavHDRRP 105 57*****************************5477777777777766 PP

Sequence ? help Back to Top
Protein Sequence Length: 381 aa Download sequence
MNGGTRNEEP GATRKRVCDY CGTSMALLYC RADSAKLCFS CDREVHSANQ LFTKHTRSLL 60 CDACDKSPAS IFCTTEGSVL CQNCDWESHN ISSSTAATAV HDRRPLEGFS GCPCLSELLA 120 VVGFENMDKK TLLLSDEDGR GRGGGGGGGF LGCGVDGFSD LEDGFSDFLV WDTPSVVSLD 180 DLIVSNPAYK FQAMGVPPLP KNRNAACGQH KEEIIHQLRL LVKSEPNLFS EDVDVKSRKG 240 FQSLASEPNT QPASFFTGFG HDAEPTAFPA QEAHESQYNG CKAENRDSCL KTSMRSYLQD 300 CFVVPDKHWY NDGTGSRANE GHGGQKNSEA SSGFPKVVPH EISCQNRETA LSRYKEKKKT 360 RRTAAAEDRP ENGGLNIWKM G

Sequence ? help Back to Top

Protein Sequence Length: 381 aa Download sequence

MNGGTRNEEP GATRKRVCDY CGTSMALLYC RADSAKLCFS CDREVHSANQ LFTKHTRSLL  60
CDACDKSPAS IFCTTEGSVL CQNCDWESHN ISSSTAATAV HDRRPLEGFS GCPCLSELLA  120
VVGFENMDKK TLLLSDEDGR GRGGGGGGGF LGCGVDGFSD LEDGFSDFLV WDTPSVVSLD  180
DLIVSNPAYK FQAMGVPPLP KNRNAACGQH KEEIIHQLRL LVKSEPNLFS EDVDVKSRKG  240
FQSLASEPNT QPASFFTGFG HDAEPTAFPA QEAHESQYNG CKAENRDSCL KTSMRSYLQD  300
CFVVPDKHWY NDGTGSRANE GHGGQKNSEA SSGFPKVVPH EISCQNRETA LSRYKEKKKT  360
RRTAAAEDRP ENGGLNIWKM G

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G47890.2	6e-72	DBB family protein