PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PCP032850.1
Organism
Pyrus communis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Maleae; Pyrus
Family bHLH
Protein Properties Length: 229aa    MW: 25142.8 Da    PI: 9.1279
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PCP032850.1genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH35.22.3e-1172119454
                  HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS
          HLH   4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54 
                  ++  rE+ RRdr+N++f eL ++l +    + +K +Ka+iL  Av+ +++L
  PCP032850.1  72 SKACREKLRRDRLNDKFVELGSILEPG---RPPKTDKAAILVDAVRMVNQL 119
                  5678**********************8...89***************9999 PP
Sequence ? help Back to Top
Protein Sequence    Length: 229 aa     Download sequence    
MVSPENTNWL FDYGLIDDTP VLGGNFAWPV QPIAGSSSVS VELDGSLGDA EGLKESGSKK  60
RVRTESCSGT SSKACREKLR RDRLNDKFVE LGSILEPGRP PKTDKAAILV DAVRMVNQLR  120
GEAQKLKDTH SGLQEKIKEL KAEKNELRDE KLRLKLEKEK LEQQLKSMNV QPGFLPPPPA  180
IPAAFTAQGQ ARGNKMVPFI GYPGVAMWQF MPPAAVDTSQ DHVLRPPVA
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G54680.12e-92bHLH family protein