PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PCP032867.1
Organism
Pyrus communis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Maleae; Pyrus
Family bHLH
Protein Properties Length: 356aa    MW: 39320.2 Da    PI: 5.4292
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PCP032867.1genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH30.37.7e-10200247455
                  HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
          HLH   4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                  +h+ +Er RR++iN ++  L+el+P +    +k   Ka +L + +++++sLq
  PCP032867.1 200 SHSLAERARREKINARMKLLQELVPGC----NKISGKALVLDEIINHVQSLQ 247
                  8**************************....899*****************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 356 aa     Download sequence    
MDPTGATVPG STLPGPELES LQFREEIHQL MTVPPENASS FTALLELPPT QAMELLHLSP  60
ESDSAPPLAG VSADPQHAPY VQLPPFNSSL IFPTNSALTE RTAKFSIFAG DGSPDISSVP  120
SNSGAELEKV KTEPAEIDSN PNSSQLTLDE TKNNQRNSAK RKEREKIKAP TKKCKTEIKE  180
DAERMPYVHV RARRGQATDS HSLAERARRE KINARMKLLQ ELVPGCNKIS GKALVLDEII  240
NHVQSLQHQV EFLSMRLAAV NPGIDFNLNS ILAAESGPLM ESNFAGMVTP LMWPEVSING  300
HRQPYQQQWH FDTLQQPGWG REEENHTFIT PEPPLISCDS SANSENLQTS HLKKEM
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G57800.21e-104bHLH family protein