PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PCP032934.1
Organism
Pyrus communis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Maleae; Pyrus
Family NAC
Protein Properties Length: 147aa    MW: 17181.6 Da    PI: 9.9087
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PCP032934.1genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM177.43.9e-5591361128
          NAM   1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlsk.kg 97 
                  lppGfrFhPtdeel+++yL +k+++ +++  ++i++vd++k+ePw+Lp+k+k +ekewyfFs rd+ky+tg r+nrat+ gyWk+tgkdke++++ ++
  PCP032934.1   9 LPPGFRFHPTDEELITFYLMNKINDATFTG-RAITDVDLNKCEPWELPAKAKMGEKEWYFFSLRDRKYPTGVRTNRATNIGYWKTTGKDKEIFNSvTS 105
                  79*************************999.89***************99999****************************************99899 PP

          NAM  98 elvglkktLvfykgrapkgektdWvmheyrl 128
                  el g+kktLvfy+grap+gek++Wvmheyr+
  PCP032934.1 106 ELAGMKKTLVFYRGRAPRGEKSNWVMHEYRI 136
                  99***************************97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 147 aa     Download sequence    
MTAEPKEELP PGFRFHPTDE ELITFYLMNK INDATFTGRA ITDVDLNKCE PWELPAKAKM  60
GEKEWYFFSL RDRKYPTGVR TNRATNIGYW KTTGKDKEIF NSVTSELAGM KKTLVFYRGR  120
APRGEKSNWV MHEYRIHSKS GFRTSKD
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G24430.28e-90NAC family protein