PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PCP032937.1

Organism

Pyrus communis

Taxonomic ID

23211

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Maleae; Pyrus

Family

bHLH

Protein Properties

Length: 215aa MW: 23449.8 Da PI: 9.9576

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PCP032937.1	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	40.7	4.2e-13	40	92	1	55
CHHHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS HLH 1 rrrahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 ++++h e+E++RR+++ + + Lr++lP + ++K s a+ +Av+YIk+Lq PCP032937.1 40 KKVMHREIEKKRRQEMGNLYGSLRSVLPLEF--IKGKRSLADHMNEAVNYIKQLQ 92 6899***********************65..*******************9 PP

Sequence ? help Back to Top
Protein Sequence Length: 215 aa Download sequence
MDVGMFNNLN TGGQRRKSSL ALTSDGAKNQ DKSNDDDEKK KVMHREIEKK RRQEMGNLYG 60 SLRSVLPLEF IKGKRSLADH MNEAVNYIKQ LQTRIKIFGA KRGELKMGTA LSNLSASTLG 120 HGSSGSSSTA ASTLVAVHPC LAGVEIVVST GRSPEQGFLL SRMLKILLGQ GLNVISCSTT 180 QVNRRLVYTI QSEVSDPTCI DFSGLQQILT EACHH

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G51790.1	1e-47	bHLH family protein