PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PCP033091.1
Organism
Pyrus communis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Maleae; Pyrus
Family bHLH
Protein Properties Length: 248aa    MW: 27449.8 Da    PI: 5.4315
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PCP033091.1genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH17.66.8e-063887154
                 CHHHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS
          HLH  1 rrrahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54
                 +r  ++erErr R++ N+ f eL + l  +     +   Ka+i+ +A++ +k+L
  PCP033091.1 38 KRIRKSERERRKREQFNELFLELADALELN----EQNSGKASIVSEATRLLKDL 87
                 678899*********************997....56677888999999988876 PP
Sequence ? help Back to Top
Protein Sequence    Length: 248 aa     Download sequence    
MIMGSPDPVP AADEGNVATE ASVRRARPGI KKQGKIPKRI RKSERERRKR EQFNELFLEL  60
ADALELNEQN SGKASIVSEA TRLLKDLCGQ IECLQKENAS LLSESNYMTL EKNELRDDNS  120
ALETQIEKLQ SEIQERVAQS KPDLNAPPHA ELRPEVPSHF TGNCISLPTQ EPSLQQAPAV  180
FVMPLCPDLQ AYPLPDATHL TSNTTSHVSK PHARYPTSVD SWPSQLLGEN TTAGKGFRQS  240
GENDPSNM
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G47640.25e-44bHLH family protein