PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PCP033163.1
Organism
Pyrus communis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Maleae; Pyrus
Family MYB_related
Protein Properties Length: 76aa    MW: 8746.35 Da    PI: 4.1418
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PCP033163.1genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding32.42.1e-102769145
                     TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHH CS
  Myb_DNA-binding  1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwq 45
                     ++ ++++E+ l+ + +++ G + W++Ia +++ gR+++++  +w 
      PCP033163.1 27 KLEFSEDEETLITRMFNLVGER-WSLIAGRIP-GRSAEEIEKYWT 69
                     678*******************.*********.***********5 PP
Sequence ? help Back to Top
Protein Sequence    Length: 76 aa     Download sequence    
MADLDHSHST SDDNSVDSRE ESSQDSKLEF SEDEETLITR MFNLVGERWS LIAGRIPGRS  60
AEEIEKYWTS RYSTSE
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G46410.14e-18MYB_related family protein