PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PCP033313.1
Organism
Pyrus communis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Maleae; Pyrus
Family MYB_related
Protein Properties Length: 96aa    MW: 11757.5 Da    PI: 9.8913
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PCP033313.1genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding51.62.1e-16956148
                     TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS
  Myb_DNA-binding  1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48
                     +g WT+eEde+l+d+++ + +g+W++I++  g++R +k+c++rw+++l
      PCP033313.1  9 KGLWTKEEDEILLDYIRVHRSGRWNRIPKVTGLKRNGKSCRLRWLNHL 56
                     678*****************************9*************97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 96 aa     Download sequence    
MEAEYEYKKG LWTKEEDEIL LDYIRVHRSG RWNRIPKVTG LKRNGKSCRL RWLNHLSPDV  60
KRGYFSEQEE DLIIRLHNLL GNRFQRYIFL LSPYFI
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G14750.13e-41MYB family protein