PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PCP033318.1
Organism
Pyrus communis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Maleae; Pyrus
Family FAR1
Protein Properties Length: 145aa    MW: 16443.1 Da    PI: 10.0758
Description FAR1 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PCP033318.1genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1FAR141.25.6e-131195185
         FAR1  1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkek.dgkwevtkleleH 85
                 +fYn YA ++GF +rk++skk + ++  ++++fvC k+ k+ + + +    +  +a  r +C+ak+ + k + ++k++v  ++++ 
  PCP033318.1 11 DFYNGYAITIGFGIRKHSSKKGSGDEGLVMKEFVCCKQRKKVDVNLN-PIGKGDKADARSDCRAKVAMLKPNgHNKFVVPVFKEQN 95
                 6*********************99999**************999988.889999************98888768888888777664 PP
Sequence ? help Back to Top
Protein Sequence    Length: 145 aa     Download sequence    
MEFDSLGEDY DFYNGYAITI GFGIRKHSSK KGSGDEGLVM KEFVCCKQRK KVDVNLNPIG  60
KGDKADARSD CRAKVAMLKP NGHNKFVVPV FKEQNYHVAS GGIRNSSCIP KDMYNVEWNL  120
MSMMQKCLTS ILRMRKRKPS HSISR
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G59470.23e-09FAR1 family protein