PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PCP033403.1
Organism
Pyrus communis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Maleae; Pyrus
Family NAC
Protein Properties Length: 121aa    MW: 14052.9 Da    PI: 9.5489
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PCP033403.1genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM113.91.7e-35610629129
          NAM  29 eleevikevdiykvePwdLp.k.kvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlskkgelvglkktLvfykgrapkgektdWvmh 124
                  +  ++++evdi+k+ PwdLp k + ++++ +wyfF+++++ky+tg r++r+t+ gyWkatg+d++vl  +ge  g  ktL+f++grapkge+tdWvmh
  PCP033403.1   6 PY-NFVAEVDIHKYAPWDLPeKsSWQNGDLKWYFFCPTERKYPTGARAKRTTECGYWKATGNDRSVLY-NGEGAGKIKTLIFHTGRAPKGERTDWVMH 101
                  55.6799************94345566777**************************************.9999************************* PP

          NAM 125 eyrle 129
                  eyrle
  PCP033403.1 102 EYRLE 106
                  ***85 PP
Sequence ? help Back to Top
Protein Sequence    Length: 121 aa     Download sequence    
MGKRLPYNFV AEVDIHKYAP WDLPEKSSWQ NGDLKWYFFC PTERKYPTGA RAKRTTECGY  60
WKATGNDRSV LYNGEGAGKI KTLIFHTGRA PKGERTDWVM HEYRLESKDL ANRGVPQICY  120
S
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G64060.11e-53NAC family protein