PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PCP033443.1

Organism

Pyrus communis

Taxonomic ID

23211

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Maleae; Pyrus

Family

CAMTA

Protein Properties

Length: 976aa MW: 109252 Da PI: 5.496

Description

CAMTA family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PCP033443.1	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	CG-1	173.4	3.2e-54	12	127	3	117
CG-1 3 ke.kkrwlkneeiaaiLenfekheltlelktrpksgsliLynrkkvryfrkDGyswkkkkdgktvrEdhekLKvggvevlycyYahseenptfqrrcy 99 +e ++rwlk+ e++ iL+n++k++++++++++p+sgsl+L+n++++r+fr+DG+ w+kkkdg+tv E+he+LKvg+ve+l+cyYah+e+np+fqrr+y PCP033443.1 12 QEaQARWLKPAEVLFILQNHDKYKFATAPAQQPSSGSLFLFNKRILRFFRRDGHRWRKKKDGRTVGEAHERLKVGNVETLNCYYAHGEDNPSFQRRSY 109 56599******************************************************************************************* PP CG-1 100 wlLeeelekivlvhylev 117 w+L+ ++e+ivlvhy+e+ PCP033443.1 110 WMLDPAYEHIVLVHYRET 127 **************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 976 aa Download sequence
MQSGYNINDL FQEAQARWLK PAEVLFILQN HDKYKFATAP AQQPSSGSLF LFNKRILRFF 60 RRDGHRWRKK KDGRTVGEAH ERLKVGNVET LNCYYAHGED NPSFQRRSYW MLDPAYEHIV 120 LVHYRETNEG KPSTGSFVQS PVSSSFSHSP SSNTTHPGSI SIVSDLHEPY QNLSSPGSLE 180 VSSDIVIKEN GRENPENLYG MGELDSLTKL DVNQALRQLE EQLSLDEDGF KGFVDDNPNA 240 LDILDYSDIA DQDQFNAFNG PEYVVHDQFY NEPAQMQGNA DYSGEHQIDD REIRDGNKES 300 ATWKEFLDPH KTSSVLMSEE KSLYTLDRNE NLPSSLSGPT EVQEHCQWLN SNGNIVDNYS 360 LPLPQEVDSF KLSPYSSVTG THSDYYTQLF EQGQIGSLES DISLTVAQNQ KFTIREISPE 420 WGYATEATKV IIIGSFLCDP SESAWTCMFG GVEVPARIIQ EGVIRCEAPP HLPGKVTVCI 480 TAGNRVSCSE VREFEYRVKS SSYTHNNSPP QEAAKSAEEL LLLVRFVQML TYDSSVQKRD 540 SAGSESLRKL KADDDSWGTI IESLLLGNGS SSTTIYWLLE VLLKDKLQQW LSSRSHEFDQ 600 YGCCLSKKEQ GIIHMIAGLG FEWALNPILN CGVNINFRDI NGWTALHWAA RFGREKMVAI 660 LVASGASAGA VTDPSSQDPV GRTAASIAAI NAHKGLAGYL SELSLTSHLS SLTLEETELS 720 KGSAEVEAEI TVNSISNRSL EGSEDQESLK NTLAAVRNAA QAAARIQSAF RAHSFRKRQL 780 KEAGVSIDDY GISSDDISVF SKLSFRNPRD YNSAAVSIQK KYRAYKGRKD FLVLRQKVVK 840 IQAHVRGYQV RKHYKVICWA VGILDKVVLR WRRKGAGLRG FRQETQTDEE SEDEDILKVF 900 RKQKVNVAIE EAVSRVLSMV ESPKARQQYH RMLTRYHQAK AELGGTSGEG FGAEAETPLS 960 GEDDLSVDDI DMYLFP

Sequence ? help Back to Top

Protein Sequence Length: 976 aa Download sequence

MQSGYNINDL FQEAQARWLK PAEVLFILQN HDKYKFATAP AQQPSSGSLF LFNKRILRFF  60
RRDGHRWRKK KDGRTVGEAH ERLKVGNVET LNCYYAHGED NPSFQRRSYW MLDPAYEHIV  120
LVHYRETNEG KPSTGSFVQS PVSSSFSHSP SSNTTHPGSI SIVSDLHEPY QNLSSPGSLE  180
VSSDIVIKEN GRENPENLYG MGELDSLTKL DVNQALRQLE EQLSLDEDGF KGFVDDNPNA  240
LDILDYSDIA DQDQFNAFNG PEYVVHDQFY NEPAQMQGNA DYSGEHQIDD REIRDGNKES  300
ATWKEFLDPH KTSSVLMSEE KSLYTLDRNE NLPSSLSGPT EVQEHCQWLN SNGNIVDNYS  360
LPLPQEVDSF KLSPYSSVTG THSDYYTQLF EQGQIGSLES DISLTVAQNQ KFTIREISPE  420
WGYATEATKV IIIGSFLCDP SESAWTCMFG GVEVPARIIQ EGVIRCEAPP HLPGKVTVCI  480
TAGNRVSCSE VREFEYRVKS SSYTHNNSPP QEAAKSAEEL LLLVRFVQML TYDSSVQKRD  540
SAGSESLRKL KADDDSWGTI IESLLLGNGS SSTTIYWLLE VLLKDKLQQW LSSRSHEFDQ  600
YGCCLSKKEQ GIIHMIAGLG FEWALNPILN CGVNINFRDI NGWTALHWAA RFGREKMVAI  660
LVASGASAGA VTDPSSQDPV GRTAASIAAI NAHKGLAGYL SELSLTSHLS SLTLEETELS  720
KGSAEVEAEI TVNSISNRSL EGSEDQESLK NTLAAVRNAA QAAARIQSAF RAHSFRKRQL  780
KEAGVSIDDY GISSDDISVF SKLSFRNPRD YNSAAVSIQK KYRAYKGRKD FLVLRQKVVK  840
IQAHVRGYQV RKHYKVICWA VGILDKVVLR WRRKGAGLRG FRQETQTDEE SEDEDILKVF  900
RKQKVNVAIE EAVSRVLSMV ESPKARQQYH RMLTRYHQAK AELGGTSGEG FGAEAETPLS  960
GEDDLSVDDI DMYLFP

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G67310.1	0.0	CAMTA family protein