PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PCP033668.1
Organism
Pyrus communis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Maleae; Pyrus
Family MYB_related
Protein Properties Length: 148aa    MW: 16940.1 Da    PI: 8.2469
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PCP033668.1genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding56.66e-181876148
                     TSSS-HHHHHHHHHHHHHTTTT............-HHHHHHHHTTTS-HHHHHHHHHHHT CS
  Myb_DNA-binding  1 rgrWTteEdellvdavkqlGgg............tWktIartmgkgRtlkqcksrwqkyl 48
                     +g+WT eEde+l+ +++q+G              +W++Ia+ ++ gRt++++k++w+++l
      PCP033668.1 18 KGPWTHEEDEILISYIQQYGHAnwralpkqagllRWSAIASSLP-GRTDNEIKNFWHSHL 76
                     79******************99**********************.************986 PP
Sequence ? help Back to Top
Protein Sequence    Length: 148 aa     Download sequence    
MVRAPAPSPC CEKMGMKKGP WTHEEDEILI SYIQQYGHAN WRALPKQAGL LRWSAIASSL  60
PGRTDNEIKN FWHSHLKKRS RTYFRLDDYD QQKHFSSKST FPVPGLIHEP PSSSNHAVPI  120
PNNDGSKTSI EDIDFWYNLF MKAGEAPE
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G23250.13e-34MYB family protein