PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PCP033708.1
Organism
Pyrus communis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Maleae; Pyrus
Family C3H
Protein Properties Length: 93aa    MW: 10003.3 Da    PI: 8.7465
Description C3H family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PCP033708.1genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-CCCH23.78.5e-081171026
                 GGTS--TTTTT-SS-SS CS
      zf-CCCH 10 artGtCkyGdrCkFaHg 26
                 +r+G Cky ++C+F+H+
  PCP033708.1  1 MRNGSCKYASNCRFNHP 17
                 89**************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 93 aa     Download sequence    
MRNGSCKYAS NCRFNHPDPT AIGGSDRPSG FGKDGPALLQ VASQSTVAPW SAPRPLNEAP  60
IYTPMMIPPP QGVSSQNSEW NGYRVLLLST PFL
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G48440.18e-25C3H family protein