PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PCP033814.1
Organism
Pyrus communis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Maleae; Pyrus
Family B3
Protein Properties Length: 225aa    MW: 25750.7 Da    PI: 9.9082
Description B3 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PCP033814.1genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B351.41.9e-16132220298
                  EEE-..-HHHHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEEEE- CS
           B3   2 fkvltpsdvlksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvkvfr 98 
                  +k +++s+v+   +l lpk f++++  +k ++  ++l de+g + ev +  +k++    l++GW++F+ ++gL +gD +vF+l++   ++l+v ++r
  PCP033814.1 132 VKPMLQSHVTGGFWLGLPKYFCSKNL-PK-RDDIVILIDEDGDECEVIYLAEKRG----LSGGWRGFAIDHGLVDGDALVFQLIR--PKTLKVYILR 220
                  68999*****************9994.43.4558***************545554....9***********************98..4556888887 PP
Sequence ? help Back to Top
Protein Sequence    Length: 225 aa     Download sequence    
MVAPKLSYEE SRQQRMEENK KRMEALNLPM LAQALKKTPN SPKPSPMKRA KARTMEKQLV  60
EVRRSSRVAN LPTPVYKEVA VVEREMRTRR YSTNRHRDLS NRVYASNEAR DDATARAEAL  120
ESDLGSDYPT MVKPMLQSHV TGGFWLGLPK YFCSKNLPKR DDIVILIDED GDECEVIYLA  180
EKRGLSGGWR GFAIDHGLVD GDALVFQLIR PKTLKVYILR VERAE
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G19184.13e-68B3 family protein