PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PCP033844.1

Organism

Pyrus communis

Taxonomic ID

23211

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Maleae; Pyrus

Family

HSF

Protein Properties

Length: 166aa MW: 18780.3 Da PI: 8.4918

Description

HSF family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PCP033844.1	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HSF_DNA-bind	94.5	1.2e-29	42	113	2	73
HHHHHHHHHCTGGGTTTSEESSSSSEEEES-HHHHHHHTHHHHSTT--HHHHHHHHHHTTEEE---SSBTTT CS HSF_DNA-bind 2 FlkklyeiledeelkeliswsengnsfvvldeeefakkvLpkyFkhsnfaSFvRQLnmYgFkkvkdeekksk 73 Fl+k++e++ed++++ ++sws+ nsfvv+d ++f+ ++Lp+yFkhsnf+SF+RQLn+YgF+kv+ ++ + + PCP033844.1 42 FLTKTFEMVEDPSTDAIVSWSKARNSFVVWDFHKFSVTLLPRYFKHSNFSSFIRQLNTYGFRKVDPDRWEFQ 113 9***************************************************************99984433 PP

Sequence ? help Back to Top
Protein Sequence Length: 166 aa Download sequence
MDGVLVKEEE VVTCTVGSSS SSSSSFSPQP IEGLHEVGPP PFLTKTFEMV EDPSTDAIVS 60 WSKARNSFVV WDFHKFSVTL LPRYFKHSNF SSFIRQLNTY GFRKVDPDRW EFQASTTSAL 120 ALVLSNSGKR IDQAGKKKYL KQVTGRHSDT ELHLNRQLCE RNCIML

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G26150.1	4e-55	HSF family protein