PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PCP033910.1

Organism

Pyrus communis

Taxonomic ID

23211

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Maleae; Pyrus

Family

NAC

Protein Properties

Length: 294aa MW: 33922.8 Da PI: 6.8838

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PCP033910.1	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	151.9	2.9e-47	19	145	3	128
NAM 3 pGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlsk..kge 98 pGfrFhPt+eel+ +yLk v gk+l++ ++i ++iy+++PwdLp k +e+ewyfF++rd+k+ +g r+nr+t++g+Wkatg+d++++s ++ PCP033910.1 19 PGFRFHPTEEELLEFYLKSMVFGKRLRF-DIIGFLNIYHHDPWDLPGLSKIGEREWYFFVPRDRKHGSGGRPNRTTETGFWKATGSDRKIVSLsnPKR 115 9***********************99.99***********8778899*********************************99755677 PP NAM 99 lvglkktLvfykgrapkgektdWvmheyrl 128 +gl+ktLvfykgrap+g+ktdWvm+eyrl PCP033910.1 116 IIGLRKTLVFYKGRAPRGSKTDWVMNEYRL 145 7*************************98 PP

Sequence ? help Back to Top
Protein Sequence Length: 294 aa Download sequence
MAANTIDPDH QMTPEFELPG FRFHPTEEEL LEFYLKSMVF GKRLRFDIIG FLNIYHHDPW 60 DLPGLSKIGE REWYFFVPRD RKHGSGGRPN RTTETGFWKA TGSDRKIVSL SNPKRIIGLR 120 KTLVFYKGRA PRGSKTDWVM NEYRLPDNCQ YLKDIVLCKI YRKATSLKVL EQMAAIEGDQ 180 IKNFHASPNS SPPPTSMDTI SFCSQALQED LTPQISTNHV VFKQEIEEAA LVIAQEQRDE 240 NAMEIKGSPP PPMYNLPELQ VPKFSMDWTQ DTVWTQMNSP WLQNLTPLAN ILNF

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G17040.1	1e-118	NAC family protein