PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PCP033988.1

Organism

Pyrus communis

Taxonomic ID

23211

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Maleae; Pyrus

Family

MYB

Protein Properties

Length: 207aa MW: 23201 Da PI: 8.2055

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PCP033988.1	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	58.7	1.3e-18	15	62	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +g+WT eEd +l+++++ +G ++Wkt+a+ g++R++k+c++rw++yl PCP033988.1 15 KGPWTGEEDRKLAEYIEIHGAKRWKTVASIAGLNRCGKSCRLRWLNYL 62 79********************************************97 PP
2	Myb_DNA-binding	45	2.5e-14	72	113	5	48
-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 5 TteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +E++l+++++k+lG++ W++Ia +++ gRt+ ++k++w+++l PCP033988.1 72 ADDEEDLILRLHKLLGNR-WSLIAGRLP-GRTDSEIKNYWNSHL 113 579*************.*****.**********986 PP

Sequence ? help Back to Top
Protein Sequence Length: 207 aa Download sequence
MAPKNDASTK KPVNKGPWTG EEDRKLAEYI EIHGAKRWKT VASIAGLNRC GKSCRLRWLN 60 YLRPNIKRGN IADDEEDLIL RLHKLLGNRW SLIAGRLPGR TDSEIKNYWN SHLSKKMNQK 120 VKTSLASTAQ ETMTTITATA PSQKTSDSSA DTTTTPSQKA SDDSADTNFD VNEFFDFSAE 180 GSYGLEWVNK FLELDEDTMA AQEKVIV

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G13540.1	4e-52	MYB family protein