PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PCP034358.1

Organism

Pyrus communis

Taxonomic ID

23211

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Maleae; Pyrus

Family

HSF

Protein Properties

Length: 104aa MW: 11827.2 Da PI: 5.432

Description

HSF family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PCP034358.1	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HSF_DNA-bind	84.2	1.9e-26	34	92	2	60
HHHHHHHHHCTGGGTTTSEESSSSSEEEES-HHHHHHHTHHHHSTT--HHHHHHHHHHT CS HSF_DNA-bind 2 FlkklyeiledeelkeliswsengnsfvvldeeefakkvLpkyFkhsnfaSFvRQLnmY 60 Fl+k+y+i++d+++++++sws+++nsfvvld+++fa ++Lp+yFkh+nf+SFvRQLn+Y PCP034358.1 34 FLTKTYDIVDDPSTNHIVSWSRDNNSFVVLDPNSFAMSLLPRYFKHNNFSSFVRQLNTY 92 9*********************************************************9 PP

Sequence ? help Back to Top
Protein Sequence Length: 104 aa Download sequence
MNLDQDPVSF SSSSAVADHP LPLEKLYDQG PPPFLTKTYD IVDDPSTNHI VSWSRDNNSF 60 VVLDPNSFAM SLLPRYFKHN NFSSFVRQLN TYVSIYHSLA SLFI

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G22830.1	7e-38	HSF family protein