PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PCP034400.1
Organism
Pyrus communis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Maleae; Pyrus
Family Trihelix
Protein Properties Length: 190aa    MW: 21812.7 Da    PI: 8.0724
Description Trihelix family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PCP034400.1genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1trihelix262.5e-081679159
     trihelix  1 rWtkqevlaLiearremeerlrrgklkkplWeevskkm...rergf..erspkqCkekwenlnk 59
                 +W +  + aLi+a  ++  +l+ g l+++ W+ev++++   + +g+  +++ +qC+++++ l+k
  PCP034400.1 16 CWNEADTEALITAWGDRYLHLNHGILRQKEWKEVADAVnstQNGGVkpSKTDVQCRNRIDTLKK 79
                 7*************************************99977777557899********9998 PP
Sequence ? help Back to Top
Protein Sequence    Length: 190 aa     Download sequence    
MNRRTRTHAP AGREDCWNEA DTEALITAWG DRYLHLNHGI LRQKEWKEVA DAVNSTQNGG  60
VKPSKTDVQC RNRIDTLKKN PYPLEGSRRD DGGDEAAGLS VGAVCRELAR AISRFGEMYE  120
RIENSKRKQM MELEKQRMEF DKELELQRLN MFMDVQVELG KKMKLPTYSH SSGPAIAESF  180
MSSFLVIFDR
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G11100.19e-27Trihelix family protein