PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PCP034401.1

Organism

Pyrus communis

Taxonomic ID

23211

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Maleae; Pyrus

Family

MYB

Protein Properties

Length: 252aa MW: 27502.6 Da PI: 5.2

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PCP034401.1	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	53.6	5e-17	15	59	2	47
SSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 2 grWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 g+W t+Ed l+++v+q+G+ +W++I+ ++ gR++k+c++rw + PCP034401.1 15 GSWNTQEDATLIKLVAQHGPSNWSLISTGIP-GRSGKSCRLRWCNQ 59 89***************************.*********985 PP
2	Myb_DNA-binding	56.7	5.4e-18	67	109	2	46
SSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS Myb_DNA-binding 2 grWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 ++++++Ed ++++a++++G++ W+tIar ++ gRt++ +k++w++ PCP034401.1 67 KPFSPQEDSIIIQAHALHGNK-WATIARLLP-GRTDNAIKNHWNS 109 689****************.*****.*********96 PP

Sequence ? help Back to Top
Protein Sequence Length: 252 aa Download sequence
MTMMGAMSGE DRVTGSWNTQ EDATLIKLVA QHGPSNWSLI STGIPGRSGK SCRLRWCNQL 60 CPTVQHKPFS PQEDSIIIQA HALHGNKWAT IARLLPGRTD NAIKNHWNSA LRRRRRQLAE 120 LSSSSSGSDA AAALGEEPDL KRQCLRASPE HESLKAGAGG EGVIVETSLT LSPPGEKAEK 180 DVAVKSEEEE HDHEAVDNDD DVEKCAVEME ETCLLTIMQR MIAQEVRNYI DSLRGDGGPT 240 FGPQSEAHQN DA

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G37260.1	9e-48	MYB family protein