PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PCP034402.1
Organism
Pyrus communis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Maleae; Pyrus
Family bHLH
Protein Properties Length: 272aa    MW: 29567.7 Da    PI: 8.4963
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PCP034402.1genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH37.83.5e-1283129354
                  HHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS
          HLH   3 rahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54 
                  ++h ++E+rRRdri   +++Lr+l+Pk+      K++Ka+ L  +++++k+L
  PCP034402.1  83 KSHRQAEKRRRDRISAQLATLRKLVPKS-----DKMDKAALLGSVIDHVKEL 129
                  79*************************8.....7****************99 PP
Sequence ? help Back to Top
Protein Sequence    Length: 272 aa     Download sequence    
MDHNCCYAGT GGLSWPQQYK SGAVPAAAAV SNESSSSFLV PWPPPPPHVS STNQFQFCGL  60
PPNSWSLTAA DGFEDDRDAS ASKSHRQAEK RRRDRISAQL ATLRKLVPKS DKMDKAALLG  120
SVIDHVKELK RKAVEVSEAF IVPTEVDEVT IDCDPAHGVT STTTSNSNIN RGNFLITASV  180
CCDDRPDLFS ELIQILKGLK LTALRAEMAS VGGRIKSVLV LCSKDGEEAV CLSTLKQSLK  240
LVLSKLAASP VAPNCRIRSK RQRFFFPFHD PN
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G40200.11e-39bHLH family protein