PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PCP034505.1
Organism
Pyrus communis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Maleae; Pyrus
Family MYB_related
Protein Properties Length: 94aa    MW: 10986.5 Da    PI: 5.1372
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PCP034505.1genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding21.94.2e-07958348
                     SS-HHHHHHHHHHHHHTTTT.....-HHHHHHHHTTTS-HHHHHHHHHHHT CS
  Myb_DNA-binding  3 rWTteEdellvdavkqlGgg.....tWktIartmgkgRtlkqcksrwqkyl 48
                      WT +E + +  a + +  +      W++ +  ++ g++  q+ks++ ++l
      PCP034505.1  9 QWTWQENKVFETALATYNIHciekgEWEKLSLLVP-GKSIDQIKSHFMQLL 58
                     7****************999***************.***********9986 PP
Sequence ? help Back to Top
Protein Sequence    Length: 94 aa     Download sequence    
MAGGVSSDQW TWQENKVFET ALATYNIHCI EKGEWEKLSL LVPGKSIDQI KSHFMQLLMD  60
LEAIESDQEP LPDYKDDLFL MTKKGSRRQR QQRQ
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G49010.15e-15MYB family protein