PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PCP034689.1
Organism
Pyrus communis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Maleae; Pyrus
Family MYB
Protein Properties Length: 333aa    MW: 37203.3 Da    PI: 4.928
Description MYB family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PCP034689.1genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding52.79.5e-171360148
                     TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS
  Myb_DNA-binding  1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48
                     rg W++eEde+l++ ++ +G g+W+++++  g+ R++k+c++rw +yl
      PCP034689.1 13 RGLWSPEEDEKLLNHINTYGHGSWSSVPQLAGLERCGKSCRLRWINYL 60
                     788*******************************************97 PP
2Myb_DNA-binding46.21.1e-1466109146
                      TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS
  Myb_DNA-binding   1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 
                      rg++++ E+  +v++++ lG++ W+ Ia++++ gRt++++k++w++
      PCP034689.1  66 RGSFSEIEERTIVEVHRILGNK-WAQIAKHLP-GRTDNEVKNFWNS 109
                      899*******************.*********.***********96 PP
Sequence ? help Back to Top
Protein Sequence    Length: 333 aa     Download sequence    
MGHNCCSKQK VKRGLWSPEE DEKLLNHINT YGHGSWSSVP QLAGLERCGK SCRLRWINYL  60
RPDLKRGSFS EIEERTIVEV HRILGNKWAQ IAKHLPGRTD NEVKNFWNSC IKKKLIAQGF  120
DPNTHNLLPS SKANPSNIIN NNNNNNNIHA CNMFSSSSVF SVNSSHVSAD TSIDILEAPY  180
LTLPSTSSPN ANHESSTIST YEFQNPNIVW STTPVQGQIN PIFLPESMGI NSVPTISTSH  240
SYPISELENI VNESFQPITK STNPEDIQLQ SQQEEACEVV EDEEANGLDG AQTNMDVSFG  300
SSNFDMDFME STVLPCGMYN YQLSPMDQLA WNC
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G12720.17e-82MYB family protein