PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PCP034755.1

Organism

Pyrus communis

Taxonomic ID

23211

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Maleae; Pyrus

Family

bHLH

Protein Properties

Length: 380aa MW: 42165.6 Da PI: 5.1797

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PCP034755.1	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	21.7	3.7e-07	200	226	4	30
HHHHHHHHHHHHHHHHHHHHHCTSCCC CS HLH 4 ahnerErrRRdriNsafeeLrellPka 30 +h+ +Er RR++iN ++ L+el+P + PCP034755.1 200 SHSLAERARREKINARMKLLQELVPGC 226 8************************86 PP

Sequence ? help Back to Top
Protein Sequence Length: 380 aa Download sequence
MDPTGATVPG STLSGPELES LQFREEIHRL MTAPENASSF TALLELAPTQ AMELLHISTE 60 PDSAPPPAAV SGDPQRTPFV QHLPFNSSLT FPTNPAPIER AAKFSTFAGD GSPDTNSALS 120 NYGAELEKVK TEPAETDSNP SSSQLTLDLT KNNQRTSGKR KEREKKIKAP TKKCKTEIKE 180 DAEKLPYVHV RARRGQATDS HSLAERARRE KINARMKLLQ ELVPGCNKFS EVILLFSSEV 240 DYCTQSILDA NFLISGTALV LDEIISHVQS LQRQVEILSM RLAAVNPRID FNFDSLLVAE 300 SGSLMESNFA SMVTPLMCPE VPINRNRQPY QQQWHFEALP QPVWGREEEN HTFISPEPSS 360 SVGILQQTQQ LQTSHLEMEM

Sequence ? help Back to Top

Protein Sequence Length: 380 aa Download sequence

MDPTGATVPG STLSGPELES LQFREEIHRL MTAPENASSF TALLELAPTQ AMELLHISTE  60
PDSAPPPAAV SGDPQRTPFV QHLPFNSSLT FPTNPAPIER AAKFSTFAGD GSPDTNSALS  120
NYGAELEKVK TEPAETDSNP SSSQLTLDLT KNNQRTSGKR KEREKKIKAP TKKCKTEIKE  180
DAEKLPYVHV RARRGQATDS HSLAERARRE KINARMKLLQ ELVPGCNKFS EVILLFSSEV  240
DYCTQSILDA NFLISGTALV LDEIISHVQS LQRQVEILSM RLAAVNPRID FNFDSLLVAE  300
SGSLMESNFA SMVTPLMCPE VPINRNRQPY QQQWHFEALP QPVWGREEEN HTFISPEPSS  360
SVGILQQTQQ LQTSHLEMEM

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G57800.1	7e-95	bHLH family protein