PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PCP034820.1
Organism
Pyrus communis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Maleae; Pyrus
Family NAC
Protein Properties Length: 277aa    MW: 30978.2 Da    PI: 4.8438
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PCP034820.1genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM36.91.1e-11281483109
          NAM   3 pGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpk......kvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevls 94 
                  +G  F+P+ e ++ +yL +k++g+ +++e+vi+++d+ k  P d ++      ++ ae+++ yf+++++     + +++r t++gyWk   +++  ++
  PCP034820.1  28 RGESFNPNPETILIKYLFNKLAGRATPVEDVIRHIDLQKGMPPDANQippslfCHGAENRSAYFYICAEVVL-GDVKTERPTSNGYWKLLSNEQVHIQ 124
                  6889***********************************99988864566776666677799***9998876.57899**********8776543333 PP

          NAM  95 k..kgel.........vglkktLvfy 109
                  +  +            vg  +t  ++
  PCP034820.1 125 TssD--SdddavavvhVGNVRTWRYH 148
                  2231..12344455556666666666 PP
Sequence ? help Back to Top
Protein Sequence    Length: 277 aa     Download sequence    
MSNTDHSFDI IAASTVTESC TEADLNKRGE SFNPNPETIL IKYLFNKLAG RATPVEDVIR  60
HIDLQKGMPP DANQIPPSLF CHGAENRSAY FYICAEVVLG DVKTERPTSN GYWKLLSNEQ  120
VHIQTSSDSD DDAVAVVHVG NVRTWRYHGR DLRRPMRAVS ETCFKIREYY LNPELEPTTL  180
IVTGLYLGCF FKKLCVCEFI DEDSELRLKQ KCRVATLAIS GGDPLFILPG HLPIGPRLIC  240
ALLDAPEPGG DPLDTLFIRA PPPSPSSPWK EESDDEW