PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PCP034924.1
Organism
Pyrus communis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Maleae; Pyrus
Family WRKY
Protein Properties Length: 151aa    MW: 17027.6 Da    PI: 10.462
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PCP034924.1genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY361.3e-11122144325
                  -SS-EEEEEEE--TT-SS-EEEE CS
         WRKY   3 DgynWrKYGqKevkgsefprsYY 25 
                  D y+WrKYGqK++kgs++pr +Y
  PCP034924.1 122 DDYSWRKYGQKPIKGSPYPRYFY 144
                  99******************999 PP
Sequence ? help Back to Top
Protein Sequence    Length: 151 aa     Download sequence    
MVRERKPSLA LQQGHCETSV VLPNNLIMGS NQFSQKPSTS LISMDGSSIN TQTRMIHYSS  60
SELFASQDSG SMFSSKKKCE EASTRCLAST GGCHCSKRRK LRIKRRIRVP AVSNKLADIP  120
PDDYSWRKYG QKPIKGSPYP RYFYVIIFIS I
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1102108RIKRRIR
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G30590.13e-25WRKY family protein